KEGG   Scomber japonicus (chub mackerel): 128366306
Entry
128366306         CDS       T09718                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
  KO
K06752  MHC class II antigen
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04145  Phagosome
sjo04514  Cell adhesion molecules
sjo04672  Intestinal immune network for IgA production
sjo05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    128366306
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128366306
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    128366306
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    128366306
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sjo04147]
    128366306
Exosome [BR:sjo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128366306
  Exosomal proteins of epithelial cells
   128366306
  Exosomal proteins of breast milk
   128366306
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 C2-set_3 DUF2273 DUF1538
Other DBs
NCBI-GeneID: 128366306
NCBI-ProteinID: XP_053182963
LinkDB
Position
10:11045077..11046974
AA seq 257 aa
MTALSFLNMHFISFFSLMCLLLSRADARYGHGLVRCQFSSKDGHDAVYLEQIYINKMLLV
QYNSTRGEYVGYTKKTKDIADGLNKNTDLLKQEQKNTELCKTSIPMVADVLLKSGDFVEP
SVKMRSVETANSKHPAMLVCSAHNFYPKQIRVTWLRDGKKVTSDVTSTDELSNGNWLYQI
HSYLEYTPIPGEKITCMVEHASLMEPKFYDWDPMPESNINKISIGTAGLVLGLVFFSAGL
ACYMRNTKRGRVQVPTS
NT seq 774 nt   +upstreamnt  +downstreamnt
atgactgcgctgtcatttctcaacatgcattttatcagcttcttttcactaatgtgtctg
ttattgtcaagagcagacgctcgctatggtcatggtttagttcgttgccagtttagttca
aaggatggccatgatgctgtttacctggagcagatctacatcaacaagatgcttctagtc
caatacaacagcactcggggagagtatgtcggctacacaaagaaaacaaaggatattgca
gatggtctcaacaaaaatacagatttattaaaacaggaacaaaagaatacagagttatgc
aaaaccagcattccaatggtagctgatgtcttattgaaatcaggtgattttgtcgagccc
agcgtcaagatgaggtcagttgagacagcgaacagcaaacatccagccatgctcgtctgc
agtgcgcacaacttttatcccaaacaaatcagagtgacgtggctgagggacggaaagaag
gtgacatctgatgtgacgtccactgacgagctgtccaatgggaattggctgtaccagatc
cactcttatctagagtacacacccatacctggagagaagatcacctgcatggtggagcat
gccagcctcatggagcccaagttttatgactgggaccccatgcctgagtcaaacatcaat
aagatttctattgggacagcagggctggtgctgggtctggtctttttcagtgctgggctg
gcttgctacatgaggaacactaagagaggacgagtgcaggtaccaacaagttga

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