Scomber japonicus (chub mackerel): 128366464
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Entry
128366464 CDS
T09718
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00310
Lysine degradation
sjo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128366464 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128366464 (setdb1b)
Enzymes [BR:
sjo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
128366464 (setdb1b)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128366464 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
128366464 (setdb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_4
DUF5604
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
128366464
NCBI-ProteinID:
XP_053183159
LinkDB
All DBs
Position
10:complement(9794389..9809656)
Genome browser
AA seq
1276 aa
AA seq
DB search
MESSEGMEVEGWDPGLEEELGISLDELKKWIEEAVEKSEIVQKKKAQLTELKKWVEQKEE
EEAVTETLLNDANQSILECEKLVKATYHKNGLVYRESSSEDEGGVGGVLSSEVIEIDDDD
DDDVIAVGCLVPPKKTVTPVKDPVLKEASTALQKTSQQVQKLVQMVNKTSPGAPLIRGPT
QPPAQSGINASAPTVFVSQVPSQSMTQPNLKIKEDELRVGMSILGKKRTKIWHRGTLVAI
NPVGNGVFKYKVKFDKGKSLLSGNHVAFDYNPTLESLYVGARVVAKYKDGNLVWLYAGIV
AEMPNNKNRMRFLIFFDDGYASYVTLPELYPVCRPLKHTWEDIEDASCRDFIEEYITAYP
SRPMVLLKLGQIIKTEWEGTWWKSKVEEVDSSLVKILFLDDKRSEWIYRGSTRLEPMFNL
KMTSANTQEKKLAGQQRTRPNMGALRSKGPVVQYTSDGHVGASPVTSQQAPPSQPIQAPQ
PPQPPQPPQPPQPPQLQQTAQPARPPQQTTQQTTQQTTQPPQTLQPLQPLQPLQPLQPLQ
PPQPPRVDNKHQMAKKSTSPFVPGVGGTHASKIMQSLSSSPSNLLGARILNTPNSASTTF
PQPYQRQLPSLAPTPAPPVAHPMATIPHQPSYRAPTDRIFYMAHTCQPACLNRVRPAKPD
VHRGKNPLLTPLLYDFRRMTGRRKVNRKMTFHVIYKAPCGLCLRNMPEIQHYLFQTRCDF
IFLEMFCLDPYVLVDRPFQPQRPFYYIPDITRGKEDIPLSCVNEIDSTPPPKVAYSKERI
PEDGVFINTSADFLVGCECTDGCRDKSKCSCHQLTLQATGCTPGALINPNAGYLHKRLEE
CLPTGIYECNKRCKCSQMCTNKLVQHGLQVRLQLFKTQNKGWGIRCLDDVAKGSFVCIYA
GKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESEAHCSDSEGSGVDMTRIKIQP
SALVSSNPVGRPPKKAQSPSSSGESNDDDDKDSKSEDESDSSDDTFVKENYYSSSSVWRS
YTTRGQVKGNKEGSQDSKDGLSASARGSDYEKPPSMPEETGKSKVASWLTSQGLKKESGD
SKSNVKSETGKKQDVMTLSDSDDVQTISSGSEDNKEKEKAPQGVTKKQVAVKSTRGIALK
TGHGMMVKTGQPGGGGGQGGQGGKAGQQGQTGGGTDNAPKNTRLFFDGEESCYIIDAKLE
GNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGK
VLLCCCGSTECRGRLL
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcagcgagggaatggaggtggagggctgggaccccggtctggaggaagaactg
ggcatttctctggatgaactgaagaagtggattgaagaggctgtggagaagagtgagatt
gtgcagaagaaaaaggctcagctgacagagctgaagaaatgggtggagcagaaagaggag
gaggaggcagtgacagagactctgctaaatgatgccaaccagtccatattggagtgcgag
aagcttgtaaaggcaacctaccataagaacggcctcgtctatcgggagagcagctcagag
gatgaagggggcgtcggaggggtgttgtcctccgaggtcattgagatagatgacgacgat
gatgatgacgtcattgctgttggctgtttggttcctcccaagaagacagtaactcctgtc
aaagatccagtgctaaaagaggcctccacagctctacagaaaacctcccagcaggttcaa
aaattggtccaaatggttaacaagacttcaccaggtgctccgttgataagaggtccaacg
cagcctccagcccagtcaggtattaacgcttcagcgccaacagtgtttgtatctcaggtt
ccatctcagtctatgacccagccgaatctgaagataaaagaagatgagctcagagtcggg
atgagcattctgggaaagaaacgcaccaagatctggcacagaggcaccctcgtcgccatc
aaccctgttggaaacggtgtcttcaagtataaagtgaagtttgataaaggcaagagtctg
ctgtctggaaatcacgtggctttcgactataaccccacactggagagtctgtatgttggg
gcccgtgtagtcgccaagtacaaggatggcaacctggtgtggctctatgctggaatagta
gcagaaatgcccaacaacaagaaccgaatgaggtttttgatcttctttgatgatggttac
gcttcatatgtgacactacctgagctctaccctgtatgccgaccattaaagcatacctgg
gaggacatagaggacgcatcatgtcgagacttcatcgaggagtatatcactgcctatccc
agcaggcctatggtgctcctaaagcttggccagatcattaaaacagagtgggagggaact
tggtggaagagcaaagtggaagaggtggatagcagcttggtcaagatcctctttttggat
gataagaggagcgagtggatctatagaggttccactaggttggagccaatgttcaacctt
aagatgacctccgcaaacacccaggagaagaagcttgctggccagcagaggacacgacct
aacatgggtgcactgaggagtaaaggcccagtcgttcagtacaccagtgatggacatgtt
ggagcctctcctgtcacatcacaacaggccccacccagccaacctatacaggcaccacaa
cctccacaaccgccacagccgccacagccgccacagccgccacagctccaacaaactgct
caacctgcacggcctccacagcaaactacacagcaaactacacagcaaactacacagccc
ccacaaactcttcagcctcttcagcctctgcagcctcttcagcctcttcagcctctgcag
cctccacagcctccacgtgtcgataataaacatcagatggcaaagaagagtacttctcca
tttgtccctggtgtgggaggcactcatgcctccaaaatcatgcagtctctttcctccagt
cccagtaatctgcttggtgcaagaattttaaataccccaaacagtgcaagcaccactttc
ccacagccgtatcagagacagctgccctctctcgctcctactccggctcctcctgtggcc
caccctatggccaccatcccacatcagccctcatatcgtgccccaacggaccgtatcttt
tacatggcacacacgtgtcagcctgcctgtctgaatcgtgtccgaccagcaaaaccagac
gtgcaccgaggaaagaatccccttctcacaccattactgtacgatttcagacgcatgacg
ggacgacgcaaagtcaatcgcaagatgacgttccacgtgatctacaaggctccatgtggg
ctttgcctgcgtaacatgccagagatccagcactacctcttccagacacgctgtgacttt
atattcttagaaatgttctgtctagacccctacgtgcttgtggatcggcccttccagcca
cagaggcccttctactatattccagacataactcgaggaaaggaggacatcccactttcc
tgcgtcaatgagattgattccaccccgccccctaaagtagcctacagtaaagaacgtatt
cctgaggatggagtattcatcaacacaagtgcagacttcctggttgggtgtgagtgcact
gatggctgtcgagacaagtccaagtgctcttgccaccagctgacccttcaagcgacaggt
tgtacaccgggagcactgatcaacccaaacgcaggatatttgcacaaacgattagaggag
tgcctgcccacagggatctatgagtgtaataagcgctgcaaatgttctcagatgtgcacc
aacaagctggtgcagcacggcctgcaggtgcgtctccagctcttcaagacccagaacaaa
ggctggggcatccgctgcctggatgatgtggctaagggttcttttgtatgcatctatgct
ggtaaaatcttgacggacgacttcgctgacaaagaaggtctagagatgggcgatgagtac
tttgctaacctggatcatatagagagtgtggagaacttcaaggagggttatgagagcgag
gctcattgttcagacagtgagggcagtggtgtggacatgaccaggataaaaatccaaccc
tctgccttagtatcatctaatcctgtggggcgaccgcctaagaaggctcaaagcccgagc
tcatcgggggagagcaatgacgacgatgacaaagactccaagagtgaagatgaaagtgac
agttcagatgacacatttgtgaaggaaaactattacagctccagctccgtgtggaggagt
tacaccacacgtggtcaggttaaaggcaacaaagaagggagtcaagatagtaaagatgga
ttgagtgcatcggccagaggaagtgattatgagaagccaccgtccatgccagaggagaca
gggaaaagcaaagtggcttcatggctcactagccagggactgaagaaggaatctggagac
agcaaaagtaatgtgaagtcagagacagggaagaagcaggatgtgatgacgctctctgac
agcgatgatgttcagaccatcagctctgggtctgaagacaataaggagaaagagaaagcc
ccccagggcgtgactaaaaagcaggtagcagtgaaatccacacgtggcatcgctctgaag
accggtcatggcatgatggtaaaaacaggtcagcctggaggagggggagggcaggggggt
cagggaggaaaagcagggcagcagggacagactggaggaggtacagacaacgctcccaaa
aacactcgtctgttctttgatggcgaggagtcgtgctacatcattgatgccaagttggaa
ggcaaccttgggcgttacctcaatcacagctgcagtcctaaccttttcgtccagaatgtg
tttgtggacacacatgacttgcggtttccctgggtggccttctttgccagcaagcggatc
cgggctggcacagagctcacctgggactacaactatgaggtgggcagtgtggaaggcaaa
gtgctgctgtgctgctgcggatccactgagtgcagaggaagactgctgtga
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integrated database retrieval system
