Scomber japonicus (chub mackerel): 128366894
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Entry
128366894 CDS
T09718
Symbol
tlr18
Name
(RefSeq) toll-like receptor 18
KO
K10159
toll-like receptor 2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04145
Phagosome
sjo04620
Toll-like receptor signaling pathway
sjo05132
Salmonella infection
sjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128366894 (tlr18)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128366894 (tlr18)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128366894 (tlr18)
09171 Infectious disease: bacterial
05132 Salmonella infection
128366894 (tlr18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128366894 (tlr18)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128366894 (tlr18)
04054 Pattern recognition receptors [BR:
sjo04054
]
128366894 (tlr18)
04090 CD molecules [BR:
sjo04090
]
128366894 (tlr18)
00536 Glycosaminoglycan binding proteins [BR:
sjo00536
]
128366894 (tlr18)
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Phagocytosis
Toll-like receptors
128366894 (tlr18)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of breast milk
128366894 (tlr18)
Pattern recognition receptors [BR:
sjo04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
128366894 (tlr18)
CD molecules [BR:
sjo04090
]
Proteins
128366894 (tlr18)
Glycosaminoglycan binding proteins [BR:
sjo00536
]
Hyaluronan
Cell surface receptors
128366894 (tlr18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
S_100
TIR_2
LRR_9
LRR_5
EF-hand_1
EF-hand_7
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
128366894
NCBI-ProteinID:
XP_053183633
LinkDB
All DBs
Position
10:30670993..30684380
Genome browser
AA seq
974 aa
AA seq
DB search
MIMKWINFCALLLGTLTSPTPSPSSSPTTNIEKGPCHIFNSGRSADCLGRQLGSVPWQQF
PSTLEAIDLSYNRLQAIHADDFLQLPRLRILRLQYNNISHIDDDAFKNNTLLEELNIFNN
SLQEIPATALTPLLNLKQLYMSNNFYKHATLADSFSKLVKLKVLSMGGPLVMGLKKEDFQ
PLKNIRLYGFAIKCSSNLSYYEPGSLEVIQTQQMGFDMAIDQRPNALLDMLRDISNKIFS
IIQFRNLFEFMYYMGEKDIFQGLGDISANQIVFHRGKFNENLLRMALTNLQVSSVKRLRL
QYIDFARSPTFVDSGAGSSITNLALDKLDLWYISNPDVLRFDWRFTWFNKIKHLSIQYVY
FNSVPCDAWVEMEGVKFMDISNNRLKDEFVFNQRCVYKGAMPNLHSFNMSSNELASLKDL
SSLTREFRQMQVLDLSNNKLGSAENSRDCVWQKNLTQLILHHNKFESEALRCLPTTLHYL
DLSYCDLDQLDMTYFKKATSLKELLLSGNKIKFIPSKWESPSLQSLALDGNSFGLISKES
FQDMPQLSRLKAGNNPYHCTCELYVFVQDTMSKTNVNLTDWPWNYRCYHPEALLNTFISK
YFPGQVACDIRLVIIICVATTTAVILILMLICYIFDLPWYTKATYQIIRAKYRAHKEKAA
GEPGTFTYHAFISYSHSDADWVRDDLLPCLENNRNPYHLCIHERDFMPGKWIIDNIIENI
ESSRKVIFVLSRNFVNSEWCNYELYFAQQRAMGKTFSDIILVLKEPIDPGSLPSKYCKLK
KMLSTKTYIEWPQHANQQAFFWEQLKSVLGKPTITRERMHSTKSRTSSVRSISLMMEDQR
PGVSMPNTDKEAEPKKEIIKRNDDLSNDKQIPVMNSQLEQAIEGLIKVFHSYSSKEGDKY
KLSKVELKTLLETELKDLMACANDPKGIDEIMSDLDENGDQELDFQEFVVLVAALTVACN
DFFEEFCKKGGKKA
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgattatgaaatggattaacttctgtgctctccttcttggaacactcacatccccaacg
ccaagcccatcttcatctcccaccaccaacattgagaaaggaccctgtcacatcttcaac
tctggccgctctgcagactgtctgggaaggcagctcggcagtgtcccatggcaacaattt
ccatccacactagaagccatagatctctcctacaatagacttcaagctatccatgctgac
gacttcctccagctccctcggcttcgcatccttcggctgcagtacaataacatttcacac
attgacgacgatgcctttaaaaacaacactctactggaggagcttaacatcttcaataac
tccctgcaggagattcccgccacagcgttgactcctctcttgaatctgaaacagctctac
atgtctaataacttttacaaacatgccactttggctgacagcttctccaaattggtcaaa
ctcaaggttctgtcgatgggtggccctctggtgatggggctaaagaaagaagattttcag
ccattgaagaacatcaggttatatggctttgcaatcaaatgctcctccaatctaagttac
tatgaacctggaagtttagaagtcatccagacacagcagatgggctttgatatggccata
gatcaacggccgaacgctctccttgacatgctgcgtgacatctccaacaagatcttcagc
atcatccagttccgtaacctctttgagttcatgtactacatgggagagaaggacattttc
cagggtttaggagatatatcagccaatcagatcgtcttccacagaggtaaattcaatgag
aacctactgaggatggctttaacaaacttacaagtttcctctgtcaaaaggttgagactt
cagtacatcgactttgcccgttcacccacatttgttgatagtggagcaggttccagcatc
acaaatctagcactggataagctggatctttggtacatcagcaatcctgatgtgctacga
tttgactggcgctttacctggttcaacaaaattaaacacctgtctattcagtatgtgtac
ttcaactctgtgccttgtgatgcctgggttgagatggaaggtgtgaagtttatggatatc
tccaacaatcgactaaaggatgagttcgtgttcaaccagcggtgtgtttataagggcgcc
atgccaaaccttcactctttcaacatgagctccaatgagctggccagtttaaaagatttg
tcatcactaacaagggagttccggcagatgcaagtgttggatttaagcaacaacaaactg
ggatccgctgaaaacagtcgggactgtgtttggcaaaaaaatctcactcagcttatcctt
caccacaataaattcgaaagtgaagcccttcgttgtctgcccaccacactgcactatttg
gacctatcatactgtgacctggaccagctggacatgacatactttaagaaagctaccagc
ctgaaagagctcctgctgagtgggaataaaatcaagtttatcccatcaaagtgggagagt
ccatcactgcagtcactggctttggatgggaattcatttggactcattagcaaggaatca
tttcaggacatgcctcaactatctcgcctaaaggctgggaataatccttaccattgcact
tgtgagctttatgtttttgtccaggacacaatgtcaaaaacaaatgtgaacctgacagac
tggccttggaactacaggtgttaccatccagaggccttactgaacacattcatatccaaa
tacttcccaggtcaagtggcatgtgatatcagactagttattatcatctgtgttgcgact
actacagcagtgatcttgatattgatgctgatttgctacatttttgacctcccgtggtat
actaaagccacgtatcagataatcagggcaaaatacagagctcacaaggaaaaagcagca
ggggaaccaggaacttttacttatcatgccttcatatcatacagtcactctgatgcagac
tgggtgagggacgacctcttgccctgtttggagaacaacaggaatccctatcatctgtgt
attcatgagagggacttcatgccagggaagtggattatcgataacatcattgagaacatt
gaaagcagccgcaaggtaatatttgtcctctcaagaaactttgtcaacagcgagtggtgc
aactatgagctgtacttcgctcagcaaagagcaatgggaaagacctttagtgacatcatc
ctcgtgttgaaagagcccattgatcccggctccctgcccagcaaatactgcaagcttaag
aagatgttgagtaccaagacctacatcgagtggccacagcacgccaaccagcaggcattt
ttctgggagcagcttaagagtgttctgggcaagccaacaataactcgagagaggatgcac
agtactaagagcagaacctcatctgtgcgaagcatttctttgatgatggaagatcagagg
ccaggagtttcaatgcctaatacggacaaagaagcagaacccaaaaaagagattattaag
aggaatgatgatttgtccaatgacaaacaaatcccagtgatgaactcccagctggaacag
gctattgagggcctcatcaaagtgtttcactcctattcgtcaaaagaaggcgacaagtac
aagctgagcaaagtagagctgaagactctgctggagactgaactcaaagacctaatggca
tgtgccaacgacccgaaggggatcgacgagattatgtctgacctggatgaaaatggagac
caagaattagacttccaggagtttgtcgttctggtcgctgcgctgaccgtcgcctgcaat
gatttcttcgaagaattctgcaagaaaggggggaagaaagcctga
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