Scomber japonicus (chub mackerel): 128367055
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Entry
128367055 CDS
T09718
Name
(RefSeq) tropomyosin alpha-4 chain-like
KO
K09290
tropomyosin 3
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04260
Cardiac muscle contraction
sjo04261
Adrenergic signaling in cardiomyocytes
sjo04814
Motor proteins
sjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128367055
04820 Cytoskeleton in muscle cells
128367055
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
128367055
04261 Adrenergic signaling in cardiomyocytes
128367055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sjo04812
]
128367055
Cytoskeleton proteins [BR:
sjo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
128367055
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
PUMA_CC
TMF_DNA_bd
CALCOCO1
Lebercilin
TMP_N
DUF1664
DUF3450
Laminin_II
CCDC138_cc
ERM_helical
Laminin_I
XhlA
Motif
Other DBs
NCBI-GeneID:
128367055
NCBI-ProteinID:
XP_053183828
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All DBs
Position
10:35512392..35521255
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AA seq
249 aa
AA seq
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MSSGVNSIDAVKKKIKVLQGQAEEAEERAENLQRQVEDEKRIREQAESEVSALSRRLQLS
EDNLDRAQERLATALHKLEEVEKSADESERGMKVIENRALKDEEKMELLELQLREAKQIA
EEADRKYEEVARKLVMVEGELERAEERAEQSESKCRVLEEELKTVFTGSKSLEAQAEKYS
LKEDRYEEEIKNLSNKLKEAETRAEFAERSVAKLEKTIDGLEDALTSARNANMELQATLN
QTMEELNSC
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcggcgtgaacagcatcgatgcggtgaagaagaagatcaaggttctgcagggc
caggcggaggaggccgaggaacgggcggagaacctccagagacaggtggaggatgagaag
aggatcagagaacaggcagagtctgaggtgtcggctctgagtcggcgtctgcagctgagt
gaagacaacctggaccgagctcaggagagactcgccaccgctctgcacaagctggaggag
gtggagaagtcagctgatgagagcgagagagggatgaaggtgatagagaacagagctctg
aaggatgaggagaagatggagctgctggagcttcagctgagagaagctaaacagatcgct
gaggaggccgaccgcaaatatgaagaggtggctcgtaagctggtgatggttgaaggagag
ctggaacgagctgaagagagagccgagcagtccgagagtaagtgtcgagtgctggaggag
gagctgaaaactgtcttcactggttcaaagtctctggaggctcaggctgagaagtactct
ctgaaggaggacaggtacgaggaggagatcaagaacctgagcaacaaactgaaggaggct
gagaccagagctgagtttgcggagcgttctgtggccaaactggagaaaactatcgatgga
ctggaagacgctctgacttcagccaggaacgccaacatggagcttcaggccactttgaat
cagaccatggaggagctcaactcctgctga
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integrated database retrieval system