Scomber japonicus (chub mackerel): 128367555
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Entry
128367555 CDS
T09718
Symbol
trpm2
Name
(RefSeq) transient receptor potential cation channel subfamily M member 2
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128367555 (trpm2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128367555 (trpm2)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
128367555 (trpm2)
Ion channels [BR:
sjo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128367555 (trpm2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
128367555
NCBI-ProteinID:
XP_053184120
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Position
11:15231915..15246799
Genome browser
AA seq
1306 aa
AA seq
DB search
MFHRGLIKVAQTTGAWIITGGTHAGVMKHVGQALRDYTLSSNPMQGQIVAIGVATWGIIH
NRDVMVHSEGCFPAHYSMDIKGQGQLSCLDNNHTHFLLVDNGTHGKYGVEIELRSHLEKC
ISGKHLGNKESGVTIPVVCVVLDGGPGTLNTIYNAMLNGTPCVILEGSGRIADVIAQVSG
LPVTRITISLISQLLEKFFGQEYENFTDFKIIKWTKQIQDIIRMSHLLTVFRVSEDDHCD
VDVAILQALLKASRINETLGTEAWKRQLELAIAWNRVDIAETEIFTEESQWKSSDLHWAM
FSALVSNKPQFVSLLLENGVSLRDFLQDEDTLCELYKQLPACFFLNKLAKRVHSSRRSMK
RVFFRSRPHRGQGESISMTHVSDEVRHLLGSFTQHLYPATTTHDFNVSMEDSSVSVSLQR
GTTALLREASIEAQRDPGRDLFLWAIVQNNRELAEIAWEQCRDCMSAALAASKILKKMAQ
EGNDADESEDMCALASHYEQHAIGVFSECYNCDEERAQKLLVRASPYWGRTTCLRLALEA
DDKSFVALSGVQALLTQIWCGGLSVDNPVWRVVICMIFFPFIYTGFLTSRRDELIHRETE
KSEEVKTVEMVTGSILRTKFRGLDPTSLQHLKPLSKWSRLACLYNSPQVKFYLNIVSYFA
FLFLFAVVLMIDFQETPSAGEVLLYIWLFSLVCEEVRQLFHDPDGFGFRKKSTMYIKDIW
NILDVMSIILFIFGLAFRLTTELFYAGKVLLCIDFVIFCLRLMAIFTISRTLGPNIIMVK
RMVKDMFFFMFLLSIWVVAYGVAKQGILIHNDNRLDWIMRGAVYEPYLIIFGNVPTNIDY
AEFNIDTCTMNGTDPLKPKCPVLNENQTPAFPEWLTIIMLCIYLLFANILLLNLLIAIFN
FTFQEVQDNTDRIWKFQRYELIKEYHSRPAAPPPFIIFSHLYLLIRNIVLSKPPIKSKGF
KDVLPQIEEEELLSWEALMKDRYLLSTQQEQSQSMERRILDTAQKVTTMTDMLEREEETN
SAAMMKRLARLEEQVSQSTKILQWIMDNLKSQGSAAKESQPTSQLPHSAASTTIDSESPN
IEKEEGGFHVNARQFDYPNSKLKRFPVPEEKVPWEVNFSSYVPTPYTPEDDHRDGAESEA
LDNYRNPSGRTGMTGRGALSRLGPNLNVDLVLTRWKDSEKSVLEFLAIGDVYQQTLTLPG
GPVESTHHLPLTLESTMGKKLYEKLNEKILEGTKVSEGYVDDSRNTDNAWVELTVINLHL
YGTSQIMTEINKVACLQWQEVNRKTRLISNQRDSLRRVADLHSRKF
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgttccacagaggtcttatcaaagtggcccagacaacaggtgcgtggatcatcaccgga
ggtacccatgcaggtgtgatgaagcatgtagggcaggctctgagggattacaccctgagc
agcaaccccatgcagggccagatcgtggcaatcggagtggcaacatggggaataattcac
aacagggatgttatggtgcattcagagggttgtttcccagcccattactcgatggacatc
aagggccagggccaactgtcctgcctcgataacaaccacacgcatttcctgctggtggat
aatggcactcatggaaaatacggggtggagatcgaattgcggagtcatctggagaaatgc
atctccggaaagcatcttggaaataaagagagtggtgttaccatccctgtggtgtgtgtt
gttttggatggaggaccaggcactctgaatactatctataacgccatgctgaatggtaca
ccgtgtgtgatcctggagggctccgggaggatagcagatgtgatcgcccaggtatcagga
ctgccagtgacccggatcactatcagcctcatcagccagttattagagaagtttttcggc
caagagtatgaaaacttcactgacttcaagataataaaatggaccaagcagattcaggac
atcatcaggatgtcacacttgctgacagtattcagagtaagcgaggacgatcattgtgat
gtggatgtagccattcttcaagcactccttaaagcttcaaggatcaacgagacactggga
acagaggcctggaagaggcagctggagctggctatagcctggaaccgtgtggacattgct
gagactgagatcttcactgaggaaagtcagtggaagtccagtgacctccactgggccatg
ttctctgccctggttagcaacaagcctcaatttgtgagtctgctactagaaaacggtgtg
agtctgagggatttcctgcaggacgaggacactctgtgtgagctctacaaacagctgccc
gcctgcttttttctaaacaagctggccaagcgggtccacagttcccgccgcagcatgaaa
cgagtgttcttcaggtctcgacctcaccgagggcaaggtgaaagcatttccatgactcat
gtgtccgatgaggtgcgccacctactgggcagtttcacccagcacctctaccctgccacc
acgacacatgacttcaacgtgtccatggaggattcatcagtgtcagtgagtcttcagaga
ggtaccacagctctactcagggaggccagcattgaggcacagagggatccaggcagagac
ctttttctttgggctattgtccagaacaatagagagctggctgaaatagcctgggagcag
tgtagagactgcatgtctgctgctctggccgccagtaagatcctgaagaaaatggctcaa
gaaggaaatgatgcagacgagtcagaggacatgtgcgcactcgccagccactatgagcaa
cacgccattggtgtgttcagcgagtgttataactgtgacgaggagcgagctcagaagttg
ttggttcgtgcatcaccgtattggggcaggacgacgtgcctgaggctggcactggaggct
gatgataagagttttgtagctctgtcaggtgttcaggctcttctgacgcagatttggtgt
ggcgggctctcagtggacaaccctgtgtggagagtcgtaatctgcatgatcttcttcccg
tttatctacactggctttctgacttccagacgtgacgaactcatccacagggaaactgag
aagagtgaggaggtgaagacagtggagatggtgacaggaagtatacttcgaacaaaattt
cgtggccttgaccccaccagcctgcagcacctgaagcctctgagcaagtggtccagattg
gcctgcctgtacaactctccgcaggtcaaattttacttgaacatagtgtcctacttcgcc
ttcctcttcctgttcgctgtggtgctcatgatcgatttccaggaaacgccatctgctggg
gaggtgctgctctacatctggctgttctctctggtgtgtgaggaggtcagacagttgttt
catgatcctgatggctttgggtttcggaagaaatccacaatgtacatcaaagacatatgg
aatattttagatgtcatgtccatcatcctctttatttttgggcttgcatttaggctgacg
actgagctcttctatgcgggtaaagtcctactctgcatcgactttgtaatcttctgcctc
cgtctcatggcgatcttcaccatcagtcgaactctgggaccaaacatcatcatggtcaag
agaatggtgaaggatatgttcttcttcatgttcctgttgagtatctgggtagtggcatac
ggtgtggcgaaacaaggcatcctcatccacaatgacaatcgactggactggatcatgcgg
ggggctgtttacgagccgtacctcatcatatttggaaatgttcccacaaatatagattat
gctgagtttaacattgacacttgcaccatgaatggcaccgatcctctgaagcctaagtgt
ccagtgctgaatgaaaaccaaacaccagccttccccgagtggctcaccatcatcatgctt
tgtatttacttgctctttgcaaacatactcctgctcaacctgctcatagctatcttcaac
tttacattccaggaagtgcaagacaacacagacagaatatggaagttccaaagatatgag
ctaataaaagagtaccacagccgtcctgctgcccctcctccatttatcatcttcagccat
ctttacctccttatcagaaacatagtgctgtccaagccccccatcaaaagcaaaggattc
aaggatgtgcttcctcagatagaggaagaggagctgttgtcctgggaggccttgatgaaa
gacagatacctgctgtccacgcagcaggagcagagccagagcatggagcgacgcatcctg
gacacagcccaaaaggttaccaccatgacggatatgctggagagggaagaggagacgaac
tctgctgctatgatgaaaagactggccagactagaggagcaggtttcccagtcaaccaaa
atcctgcagtggattatggacaatctgaaatctcagggttctgcagcaaaagaatcacaa
ccaacgagtcagctaccacattctgcagcgtcaactacaatagacagtgagtcccctaac
attgaaaaagaggaaggcggatttcatgtgaatgcccgtcagttcgactacccaaacagc
aaacttaaacgcttccctgtgcctgaggaaaaggtgccatgggaggtcaacttcagctca
tacgtgcctactccttataccccagaagatgaccacagggacggagcagaatcagaagcc
ttagataattacagaaacccatcagggaggacgggcatgacgggacgaggtgcgctcagc
cgcttgggtccaaatctgaatgtagaccttgtgctcacacgctggaaagacagcgagaaa
tctgttttggagtttctggccattggagacgtgtaccaacaaaccttgactttacctggg
ggacctgtcgaatctactcatcacctgccactgactcttgagagcaccatggggaagaag
ctgtatgaaaagttgaatgaaaaaatattggagggcacaaaggtgtctgagggttatgtg
gatgacagcaggaatacggataacgcctgggtggaactcactgtcataaaccttcacctg
tacggaacgagccagattatgacagaaatcaataaggtggcatgtcttcagtggcaggaa
gtgaacagaaaaacacgacttatctcaaaccaaagagactctttgcggcgggtcgctgac
ctgcacagcaggaagttctaa
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