Scomber japonicus (chub mackerel): 128368341
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Entry
128368341 CDS
T09718
Name
(RefSeq) C-X-C chemokine receptor type 4-like
KO
K04189
C-X-C chemokine receptor type 4
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03250
Viral life cycle - HIV-1
sjo03260
Virion - Human immunodeficiency virus
sjo04020
Calcium signaling pathway
sjo04060
Cytokine-cytokine receptor interaction
sjo04144
Endocytosis
sjo04672
Intestinal immune network for IgA production
sjo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128368341
03260 Virion - Human immunodeficiency virus
128368341
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128368341
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128368341
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128368341
09142 Cell motility
04810 Regulation of actin cytoskeleton
128368341
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
128368341
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sjo04030
]
128368341
04050 Cytokine receptors [BR:
sjo04050
]
128368341
04090 CD molecules [BR:
sjo04090
]
128368341
G protein-coupled receptors [BR:
sjo04030
]
Rhodopsin family
Chemokine
CXC Chemokine
128368341
Cytokine receptors [BR:
sjo04050
]
Chemokine receptors
CXC Chemokine
128368341
CD molecules [BR:
sjo04090
]
Proteins
128368341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
CXCR4_N
Cyclin_N
Motif
Other DBs
NCBI-GeneID:
128368341
NCBI-ProteinID:
XP_053185106
LinkDB
All DBs
Position
11:11697102..11699072
Genome browser
AA seq
378 aa
AA seq
DB search
MDDMEFSFGTFVFDNNSFDNMTEMSGDFGDYQEACDGALSSSFNKIFLPTVYGIIFVLGV
IGNGLVIVVMGYQKKVKTMTDKYRLHLSVADLMFVLTLPFWAVDAASNWYGGNILCVSVH
VIYTVNLYSSVLILAFISLDRYLAVVRATNSQATRKLLANKVIYVAVWLPAVVLTVPDLV
FARAQTTGSSNILLMGDESLDTAHSRVICERIYPQESNLIWTAVFRFQHILVGFVLPGLV
ILICYCIIITKLSQGTKGQALKKKALKTTVILILCFFSCWLPYCVGIFLDTLIMLNVVSR
SCELEQAVNKWISITEVLAFFHCCLNPILYAFLGVKFKKSAKTAFSSRSSQKVTLMTKKR
GPISSVSTESESSSVLSS
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggatgatatggagttcagtttcggcacgtttgtgtttgacaacaacagttttgacaac
atgacagagatgtctggagactttggagactaccaggaggcatgtgatggagctctcagc
agcagcttcaacaagattttcctacccacagtttacggaataatattcgttcttggggtc
attggcaatggattagtcattgtcgtcatgggctatcagaaaaaggtcaaaacaatgaca
gacaagtaccggctccatctctccgtggcagacctcatgtttgttcttacgcttcccttc
tgggctgtggatgcagccagcaactggtacggtggaaatatcctctgtgtatctgtacat
gtgatctacacagtcaacctgtacagcagcgtgttgattctagccttcatcagtctggac
agatacttggctgtggtgcgtgctaccaacagccaagccacaaggaagcttctagcaaac
aaagttatctatgtggctgtgtggcttcctgcagttgtgctgactgtacctgacttggtg
tttgccagggcacaaaccacagggtcttcaaacatcctcctgatgggagatgaaagcttg
gacactgcacactccagggtcatctgcgagcgcatctacccccaggaaagcaatctcata
tggacagccgtcttccgcttccaacatattctggtgggtttcgtactgcctggcctggtc
atcctcatctgctactgcatcatcatcaccaagctgtcacaaggtaccaagggacaggca
ctgaagaagaaagcactgaagaccacagtcatcctcattctgtgttttttctcctgctgg
ctgccctactgtgtgggcatctttttggacaccctcatcatgctgaacgtggtctcccgc
tcctgtgaactggaacaagcagtaaataagtggatttctatcactgaagtcctggcattt
tttcactgctgcctaaaccccatcctctatgctttcctgggagttaagttcaagaagtca
gcaaagaccgcattcagcagcagatcaagtcagaaagtgactctcatgacaaaaaagcga
ggtccaatttcatctgtgtcaactgagtcagagtcctcaagtgttttgtcaagttaa
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