Scomber japonicus (chub mackerel): 128368876
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Entry
128368876 CDS
T09718
Symbol
tcf3a
Name
(RefSeq) transcription factor 3a isoform X1
KO
K09063
transcription factor E2-alpha
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128368876 (tcf3a)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
128368876 (tcf3a)
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GFIT
Motif
Pfam:
HLH
Borrelia_REV
Motif
Other DBs
NCBI-GeneID:
128368876
NCBI-ProteinID:
XP_053185749
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Position
12:complement(15192986..15218454)
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AA seq
632 aa
AA seq
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MATVGTDKELSDLLDFSAMFEPPVSNGKNQPTTLASSRFSGIDERSGSSSWGPGEQNSPS
FSQGRGYGEESIYSEQEGIASSPSFGSGIVGKGERGPYSSFAGQPGFMPSDIPISSPNAL
SPSGLKSNSQFYSSYEGSNARRRPSQDPIESQPKKIRKVPPGLPSSVYASASGEDFNRDN
AGYPASKAGNVYPPPFYMQEGLHPPSDPWGSAGSMVQPGYSAMPGNTPHLSQHGPFTAIN
PQDRLKRQPLPLSPQNYPLHGSEVNGAHPAGFHAGSSSFGVPSHTPPIAGTDTIMANRGA
VPGSSGDEIGKALASIYPSDPNSNGYSPSPSTPSGSPQAVSGSASQWTRSSGQATPSPNF
QGGIQSMSNKLEDRLDEAINVLQRHASGQGVPGLAEMHSLLSSGLGLPPAFSSAALGLAS
RLPGLLSGHHEDSAGLPSSGGLLHGHHGSTSVQPGSQPEGFTSLPGLNRSSGNDIKREKK
EDDENCSITDKSEDENKDSNAHLGSSLDDNDDDDEDLPVEIKAGREKVRRLANNARERLR
VRDINEAFKELGRMCQVHLSYEKPQTKLSVLQQAVNVILNLEQQVRERNLNPKAACLKRR
EEEKVSGVDPQMQLSGGHPGLGGDGHNSVSHM
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggctacagtgggaacagacaaggagctcagcgacttgctggattttagcgcgatgttt
gagcctccagtttcaaacggcaagaatcagccgactactctcgccagcagtcgcttttca
ggtatagatgagaggagtgggtccagttcctgggggccaggagagcagaacagtccatct
ttcagccagggaaggggttatggagaagaaagtatttacagtgagcaggagggcattgcc
tcttccccgtcatttggatcagggattgttgggaagggtgagcgaggaccgtactcctca
tttgcaggacagccgggctttatgcccagtgacatacccatatccagtcccaatgccctt
tccccgtctggtctgaagtccaactcccagttttattcctcctatgaggggagcaatgct
cgcaggcgaccctcccaggaccccattgaatcacagccaaaaaagatcaggaaggtgccc
cccggcctgccctcctcagtttatgcatcagcctcaggagaggattttaacagggacaat
gctggctacccagcctctaaggcaggaaacgtctacccaccaccattctacatgcaagaa
ggcctccacccaccctccgatccgtggggctctgctgggtcgatggttcagcctggttac
tctgccatgccgggaaacaccccccatctgagccagcatgggcccttcactgccatcaac
ccacaagacagactgaaacggcagccgcttcccctctctccccaaaattaccccctgcat
ggcagcgaggtgaatggggctcatcccgctggcttccatgctgggtccagcagcttcggc
gtccctagccacacaccgcctattgctggcactgacaccattatggccaatcgcggagca
gttcctggaagttcaggtgatgagattggcaaagccctggcatctatctatccttcagac
ccgaacagtaatggctactctccgtccccatctactccctccggctctcctcaggctgtg
tcaggctctgcatcccagtggactcggtcctctggccaggccacaccttcacctaacttt
caaggtggaattcaatccatgtctaataaactggaggatcgtctggatgaagccatcaat
gttcttcagcgtcacgccagcggacaaggagtgccaggactggctgaaatgcacagcctg
ctgtcgtctggcttagggttacctccggcttttagcagtgcagcacttggacttgccagt
cgtctgcctggactgctgtccggtcaccatgaagactctgctggtctgccctctagtgga
ggacttttgcatggtcaccacggctccacatctgtccagccaggctctcagcctgaaggt
tttaccagcctgcctggtctaaatcgttccagtggtaatgatatcaaacgagagaagaag
gaggacgacgaaaactgctccattactgacaagtcagaggatgagaacaaagactcgaat
gcccaccttggatcaagtctggatgataatgatgatgatgatgaggatctgccagtggag
attaaggctgggcgggagaaagtgcggaggttggcaaacaacgcccgcgaacggctccgt
gtgcgggacatcaacgaggcttttaaggagctgggccgtatgtgtcaggtccatctgagc
tatgaaaaaccgcagaccaaattgagcgtactgcaacaggccgttaacgttatactcaac
ctggagcagcaagttcgagagcgtaatttgaacccaaaggctgcatgcctcaagagaaga
gaagaggagaaagtgtcgggtgtggacccccagatgcagctcagtgggggtcacccaggt
ctaggaggcgatggacacaactctgtgagccatatgtaa
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