Scomber japonicus (chub mackerel): 128369548
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Entry
128369548 CDS
T09718
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04514
Cell adhesion molecules
sjo04520
Adherens junction
sjo04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128369548
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
128369548
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
128369548
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128369548
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
128369548
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
128369548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
Fn3_VIN3
CRLF2-like_D2
V-set
PTP-SAK
Tc-R-P
DSPc
C2-set_2
Y_phosphatase3
Fn3_PTPRU
PTPlike_phytase
PTP-NADK
ICAM_N
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
128369548
NCBI-ProteinID:
XP_053186598
LinkDB
All DBs
Position
12:23246305..23427959
Genome browser
AA seq
1899 aa
AA seq
DB search
MVPNTHLAMPLLPRGALLFLLLLNCMGISSLADSLPSFVKSPEDQTGISGGVASFVCQAA
GEPKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSAGEIN
TSAKLTVLEENQIPHGFPVIDMGPQLKVVERTRTATMLCAASGNPDPEISWFKDMLPVDI
SSSNGRIKQLRSGALQIENSEESDQGKYECVAMNSAGTRYSAPANLYVRVRRVPPRFSIP
PTNQEVMPGGSVNLTCVAVGSPMPYVKWMKGEVELTKEEEMPMGRNVLEVTNIRESANFT
CVAMSSLGMIQATAQVTVKALPKPPTSLIVTETTATSVTLTWDSGNPEPVSYYMIQYKAK
ASDNGFQEVEGVATTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSDPVETRTGEQAPSSPP
LHVQARMLSASTMLVQWEQPEEPNGQIRGYRVYYSSDLTAPLSAWQKHNTDDSSLTTISG
LTPDITYSLRVLGFTSVGDGPPSDILQVKTQQGVPAQPSSFEAEAELDTRIVLTWLWPVQ
DPITKYELQYWEDGSDNKLHVSFNPAGSYAVDGLKPDTLYHFSLAARSEMGLGVYTQPIE
VRTAQSTPSAPPQEVHLVSLSSTSLKVSWVAPPAASRHGAIVRYTVSYQALTGEDTERHD
MAGIGAEATSYVLNGLEKWTEYQVWVRAHTDVGPGPESAPVRMRTKEDVPGAPPRKLEVE
AINSTAIRVTWKPPLQVKQHGQIRGYQVIFSRLENGEPRGQPNIMDVALPEAQEAIISGL
HSETTYSVTVAAYTTKGDGARSKAKVITTTGAVPGKPTMMISTTMGNTALIQWQPPKEMV
GELMGYQLQYKRTDDDTFISRELGKNEDHYTATGLHKGATYVFRLSARNRAGIGEAYVKE
INTPEDVPSGFPLNLQVTGLTQSSTQLTWEPPLLPERNGKIQYYMVVYRDINSQQNSTNR
TSDRHMTIQGLNPDTTYDIRVQAFTSKGGGPLSPSIQSRTMSNDFPTLNFGVKAVMKTSV
LLTWDLPPNYKPVVPFKILYNQQSVEVQGNLKRKLITQLQPDTDYSFVLTSRGNIAGGLQ
QQVSIRTAPDLIQTRPIYTTHQAQGGKMTINLPKVQTTTRVRWYYIVVVPVSQSTRRWKN
PDEMDLDELLKSSEGPVLRRRRHLDTSKPYIAAKLASLPTTFILGDEKTYNGFYNKPLTS
QQEYLCFVLAVLRYEGTDGTANYMTFSASPYSDLIQVTTRMSQGMEQPEMLWVMGPVLAV
VLIIIIVIAILLFKKKRASPLPKDEHSGGVKDSLLANSSDPVEMRRLNYQTPGMREHPPI
PVIDLADHIERLKANDGLRFSQEYESIDPGQQFTWENSNMEVNKPKNRYANVIAYDHSRV
VLTSVDGKSSSVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRMVWEQRSSTIVM
MTRLEEKSRVKCDQYWPSRGTETYGMIQVTMLDTVELATYSVRTFALYKNGSSEKREVRQ
FQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERM
KHEKSVDIYGHVTCMRAQRNYMVQTEDQYIFIHEALLEAATCGNTEVPARNLYAHIQKLT
QPPPGETVTAMELEFKRLANSKAHTSRFISANLPCNKFKNRLVNIMPFESTRVCLQPIRG
VEGSDYINASCIDGYRTQKAYLATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREK
CHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGV
PKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDLF
QTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaatactcacctggcaatgcccctcttgcccagaggggcgttgctgttcctg
cttctactcaactgcatggggatctcctctctggcagacagcttgccaagttttgtcaaa
tccccagaggaccagacgggcatctcaggcggagttgcgtcgtttgtgtgccaggccgcc
ggggagcccaaaccccgaattacctggatgaagaaaggcaagaaagtcagctctcaacgc
tttgaggtgattgagtttgatgatggttcgggctccgtactgcggatccagccactgcgc
acacacagagacgaagccatttatgagtgcacagccaccaacagtgctggcgagatcaac
accagtgccaagcttacagtgcttgaagagaaccagatcccccatggcttccccgtcata
gacatgggtccccagctgaaggtggttgaacggaccagaactgccaccatgctgtgtgct
gccagtggaaatccagacccagagatctcctggttcaaggacatgcttcccgtggacatc
agcagcagcaacgggcgcattaaacagcttcgctcaggagccctacaaattgagaacagc
gaggaatcagaccaggggaaatatgaatgtgttgccatgaacagtgctgggacccgttac
tccgcccctgccaatctctacgtacgagtgcgaagagtcccacccagattctccattcca
cccaccaaccaagaggtgatgccaggcggcagcgtcaacctgacatgtgtggcggtgggc
tcgcccatgccttacgtcaagtggatgaagggtgaggtggagctgaccaaggaagaagag
atgccaatgggacgcaacgtgctggaggtcaccaacatccgggagtcagccaactttacc
tgtgtggccatgtcctccctgggcatgatccaagccacagcccaggtcactgtcaaagca
ttgccaaagccccctacctcgctcatagtgactgagaccacagcaaccagcgtgactctc
acctgggactccgggaacccagaacctgtctcctactacatgattcagtacaaagccaag
gcatcagacaatggcttccaggaagtggagggtgtggccaccacccgttacagcatcggt
ggacttagcccctactctgaatatgagtttcgtgtcatggctgtcaacaacattggccgc
gggccacctagtgaccctgtggagacacgcactggtgaacaggccccctcctcaccacct
ctgcacgtccaagcacgcatgctgagtgccagcacaatgctggtccagtgggagcaaccc
gaggaacctaacgggcaaatcaggggctaccgggtctactacagctcggacctaacggct
ccactcagcgcctggcagaagcacaacacagatgacagcagtctgaccaccatctcaggc
ctgactcctgatatcacctacagcctcagggtgctggggtttacctcagtaggcgatggg
ccaccttctgacatcctgcaagtcaaaacccagcagggagtccctgcccagccgtccagc
tttgaagctgaagccgagttggatacccgcatcgtgctaacatggctgtggccagtacag
gaccccatcactaagtatgagctgcagtactgggaggatggctcagacaacaagctccat
gtgtccttcaacccagcgggctcatatgctgtggatggtctgaagcctgacactctgtac
catttctcgctggcagcccgttctgagatgggtttaggcgtctacactcagcccatagag
gttcgcaccgcccagtccaccccatctgccccccctcaggaggtacatctggtcagcctc
agctccactagcctcaaggtgagttgggtggcaccgcccgccgctagtcgccacggcgcc
attgtgcgctacacagtcagctaccaggccttgactggagaggacacggagcgacatgat
atggcgggcatcggtgcagaagctaccagctatgtgctgaacggcctggagaagtggact
gagtatcaggtgtgggtgagggcacacactgacgtgggcccgggccctgagagtgcccca
gtgaggatgagaactaaagaggatgtgccgggagcacctcccaggaagctagaggttgaa
gccataaactcaacagccattcgggttacctggaagccacccctgcaggtgaaacagcac
ggccaaatccgaggataccaggtcatcttctcccggctcgaaaacggtgaaccacgaggc
cagcctaacatcatggacgtggctttgccagaggcacaggaggccatcattagtggactg
cattctgaaaccacctactctgttactgtagcagcatacaccacaaaaggagatggagca
cgtagtaaagctaaagtcatcaccaccactggagcagtgccaggcaagcccactatgatg
atcagcaccactatgggcaacacagcgctgatccaatggcagccgccaaaggaaatggtt
ggtgagttgatgggctaccagctgcagtacaagcgtactgatgacgacactttcatttca
cgtgagctggggaagaatgaagaccactacactgccactggattgcataaaggcgccacc
tacgtcttccgccttagtgctcgtaaccgagcaggtatcggtgaggcctacgtaaaagag
atcaacaccccagaagatgtgccctcaggcttccccttgaacctgcaagtcacaggactg
acccaatccagcacccagcttacatgggagcccccactgctgcccgaaaggaacggcaag
atccaatactacatggtggtgtacagggacatcaacagtcaacagaacagcaccaaccgc
acttctgacaggcacatgactatccagggccttaatcctgacaccacttacgacatccgg
gtgcaggccttcaccagcaagggtgggggacccctcagccccagcatccagagcaggacc
atgtcaaatgattttcccaccctaaacttcggtgtcaaagctgtcatgaaaacatctgtc
ctcctcacctgggatttgcctccaaactacaaaccagtagtgcctttcaagatcttgtat
aaccagcaaagcgtggaggtgcaaggaaacctgaagaggaagctgatcacacagctgcag
ccagacacagactactcttttgtgctgacaagcaggggtaacatagcaggaggtctgcag
cagcaggtgtccatccgaactgccccagacctgatccagaccaggcccatttacaccaca
catcaggctcaaggtggtaaaatgaccatcaacttgccaaaggtccagaccaccacacgt
gtgaggtggtactacatcgtggtggtgccggtgtcccaatcaacgcgccggtggaagaat
ccagacgagatggacctggatgagctgttaaagtcaagtgaaggccctgtcctgaggcgt
cgacgtcaccttgacacctccaagccttacattgccgccaagttggcttcactgccgacc
actttcatccttggcgatgagaagacgtacaatggcttctacaacaagcccctgaccagt
cagcaagagtatctctgttttgtcctggccgtactcagatatgaagggacagacggcact
gctaattatatgacattttcagcaagtccctactcagacctcatccaggtcaccacacgt
atgtctcaggggatggagcaacccgaaatgttgtgggtcatgggcccagtgttggctgtg
gtcctcatcatcatcatcgtcatcgccatcctgctctttaagaagaaacgggcatcacct
ctacctaaggatgagcactctggtggggtgaaagactccctgctggctaactcatccgac
cccgtggagatgagaagactcaactaccaaaccccaggaatgagggagcacccacccatt
cctgtcattgacctggctgaccacatagagcgactgaaagccaatgacggcctccgcttt
tcccaagagtatgagtccattgatccaggccagcagtttacctgggagaactccaacatg
gaagtcaacaagccaaagaatcgctatgcaaacgtcatcgcctacgaccactccagagta
gtccttacctctgttgatggtaagagctcatccgttcctggcagtgactacatcaacgcc
aactacatcgatggttacaggaagcagaatgcctacatcgccacacaggggcctctgccg
gagacattgagcgacttctggaggatggtatgggagcaaagatccagcaccatcgtcatg
atgaccagactggaggagaagtcacgggtgaagtgtgaccagtactggccatcacgagga
acagagacctatgggatgatccaggtcaccatgctggacactgtggagttggccacttac
agcgtccgtacattcgccctgtacaagaacggctccagtgagaagagagaggtgcgccag
ttccagttcatggcctggccagaccacggggtgccagagtacccaacccccatcttggct
ttcttaaggcgggtaaaggcctgcaatcctccagatgcaggacctatggtggttcactgc
agcgctggcgtgggcaggactggctgcttcattgtgatcgatgccatgctggaacgcatg
aagcatgaaaaatctgtagacatctacggacacgtgacgtgcatgcgagcccagaggaat
tacatggtacagaccgaggaccagtacatcttcattcacgaggccctactggaggccgcc
acctgcggtaacaccgaggtgccggcacgcaacctgtacgcccacatccagaaactcacc
cagccaccacctggcgagacagtcaccgccatggagctggagttcaagagactggccaac
tccaaagcccacacttcacgcttcatcagcgccaacttgccctgcaacaagttcaagaac
cgtctggtcaacatcatgccttttgagtccactcgcgtctgcctgcagcccatccgtggc
gtcgagggctccgactacatcaatgccagctgcatcgacggctacagaacacagaaggcc
tatctggccacacagggtccactggccgagactactgaggacttctggaggatgctgtgg
gagcacaactctacaattgtcgtcatgctcaccaagctacgagagatgggacgggagaag
tgccatcagtactggccagcggagcgttcagccaggtaccagtactttgtggtggatcca
atggctgagtacaacatgccccagtacatcctccgagagttcaaagtcacagatgccagg
gatggccagtccagaacaatccgccaattccagttcactgactggcccgagcaaggtgtg
ccaaaaactggagagggcttcattgattttattggacaagtgcacaaaaccaaggaacag
tttggacaggatggaccaatcactgtacactgcagtgccggggtgggcaggacaggcgtc
ttcatcaccctcagcattgtgctggagaggatgaggtacgagggcgtggtcgacctcttc
cagactgtgaagacacttcgcacccagcggcctgccatggtgcagaccgaggaccagtac
cagttgtgctacagggcagcattggagtacctggggagctttgaccactatgcaacgtaa
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integrated database retrieval system
