Scomber japonicus (chub mackerel): 128372106
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Entry
128372106 CDS
T09718
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128372106 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128372106 (nthl1)
Enzymes [BR:
sjo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
128372106 (nthl1)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
128372106 (nthl1)
Prokaryotic type
128372106 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
128372106
NCBI-ProteinID:
XP_053188390
LinkDB
All DBs
Position
2:29489549..29493250
Genome browser
AA seq
400 aa
AA seq
DB search
MTSPYFMHSRARVTRRANQTASRIPTASLGSKLTNRRRDEAPHSSVAVKEEEEEARISEE
RPSSASLSTGGCHEPQHTAVQPKTESNAVLLTSPHRRRRQVKLEYDNDDGVLPVKTERWE
PPEWRKQLGFIREMRSSRDAPVDSMGAEKCYDTEAPAHVRRFQILVSLMLSSQTKDQVTA
AAMQKLRAHGCTVENILATDDETLGKLIYPVGFWRNKVKFLKLTSAMLQKEFGGDIPDSV
EGLVRLPGVGPKMAHLAMGIAWNQVSGIGVDTHVHRISNRLEWLKKPTKNPEETRKALEE
WLPRELWSEINWLLVGFGQQVCLPVNPLCSVCLNQHSCPSAHKTSPTKRPKAGSPRSPSP
TSPFHAKTEPGSAVKDERIKEESLPTPVSPTTHRRKLKQH
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgacctctccttatttcatgcacagcagagccagagtcacccggagagctaaccagaca
gccagccgcatacctacggcctctctcgggtccaaacttaccaacagacggagggacgag
gctccgcattcctccgtggcggtgaaggaggaggaggaggaggcgaggatctctgaggaa
agaccctcctcggcctccttatctacgggtggttgccatgaaccccaacacaccgctgtg
cagccaaaaacagaatctaacgctgtcctgctaacgtcacctcaccggaggaggaggcag
gtaaagttggaatatgacaacgatgatggcgttttgccggtgaagacagagcgctgggag
ccgcctgagtggaggaaacagttaggatttattcgtgagatgaggagcagtcgtgatgca
cctgtagacagcatgggagcagagaaatgctacgacacagaagctcctgcacacgtgaga
cgtttccagatattggtatcactcatgctgtccagtcagaccaaggaccaggtgacagca
gcggctatgcagaagctccgagctcacggctgcacagtggaaaacatactggctaccgat
gatgagacgttgggaaaacttatctaccctgtcggcttctggaggaataaggtgaagttt
ctgaagctgacgtcggccatgctgcagaaggagtttggaggggacatcccggacagcgtg
gaggggctggtccgcctgccaggagttggacccaagatggctcacctggctatgggcatt
gcgtggaaccaggtgtccggcataggtgtggacacgcatgtgcatcgcatctctaacagg
ttggagtggctcaagaagccgaccaagaacccagaggaaacacgcaaggcactggaggag
tggttacctagggagctgtggagtgagatcaactggctgctggtggggtttggacagcag
gtttgtcttcctgtcaaccctctctgctctgtgtgtctgaaccagcacagctgcccgtct
gcccacaagacctctcccactaagaggcctaaagctggatccccgcgctctccaagtcca
acttctcccttccacgcaaaaactgaacctggatctgctgtcaaagatgagagaataaaa
gaggagtcactgcccacacctgtttcccccaccacacacagaaggaagctaaaacagcat
taa
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