KEGG   Scomber japonicus (chub mackerel): 128372720
Entry
128372720         CDS       T09718                                 
Symbol
ggps1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo00900  Terpenoid backbone biosynthesis
sjo01100  Metabolic pathways
Module
sjo_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    128372720 (ggps1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:sjo01006]
    128372720 (ggps1)
Enzymes [BR:sjo01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     128372720 (ggps1)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     128372720 (ggps1)
    2.5.1.29  geranylgeranyl diphosphate synthase
     128372720 (ggps1)
Prenyltransferases [BR:sjo01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   128372720 (ggps1)
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 128372720
NCBI-ProteinID: XP_053188832
LinkDB
Position
14:23550891..23564022
AA seq 317 aa
MDGDSAAASERILLEPYKYLLQLPGKQVRTKLAQAFNHWLNVPEDKLQVIIGVTEMLHNA
SLLIDDIEDSSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLEHPEAVPVFTRQL
LELHRGQGLDIHWRDTYTCPTEQEYRNMVLQKTGGLFGLAVGLMQLFSDWKQELKPLLDT
LGLFFQIRDDYANLSSREYSENKSFCEDLTEGKFSFPIIHAIWSRPESTQVQNILRQRTE
NVDIKRYCVDYLEKVGSFAYTRQTLRDLEVEAYRLIKEFGGNPQLESLIKHLSKMHHEAE
ATAAAESSTEPHSSQNH
NT seq 954 nt   +upstreamnt  +downstreamnt
atggacggggattcggcggcagcttcggagcgaatcctgctggagccgtacaagtacttg
ttgcaactgccaggaaagcaggtgaggacgaaactggcccaagcatttaaccactggctc
aacgttccagaggacaaactgcaggtgatcatcggagtgaccgagatgctgcacaacgcc
agcttgctcatagacgacatcgaggacagctccaagctgcggcgaggcttccccgtggcc
cacagcatctacggcatcccctccgtcatcaactccgccaactacgtctacttcttgggt
ctggaaaaggtattgacgcttgagcaccccgaggccgtccccgtgttcacccggcagctg
ttggagctgcaccgcggccagggcctagacatccactggagggacacctacacctgtccc
acagagcaggagtaccgcaacatggtgctgcaaaaaaccggggggctcttcggcctggct
gtgggtctcatgcagctcttctccgattggaagcaggagttgaaacccctcctggacacg
ctcggcctcttcttccagatccgcgacgactacgccaacctgagctctcgcgagtacagc
gagaacaagagcttctgcgaggacctgacagagggcaagttctctttccccatcattcac
gccatctggtctcgtccagagagcacccaggtgcagaacatcttaaggcagcgcacggag
aacgtggacatcaaacgatactgcgtggactacctggagaaggtgggctcgttcgcctac
acccgtcagactctgcgggatctagaggttgaggcgtaccgactcatcaaggagttcggg
gggaaccctcagctggagagcctgatcaaacacctcagcaaaatgcatcacgaagccgaa
gccacagccgcagcagaatccagtactgagccgcactccagccaaaaccactga

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