Scomber japonicus (chub mackerel): 128372943
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Entry
128372943 CDS
T09718
Symbol
tnfaip3
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04217
Necroptosis
sjo04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128372943 (tnfaip3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128372943 (tnfaip3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjo01002
]
128372943 (tnfaip3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128372943 (tnfaip3)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128372943 (tnfaip3)
Peptidases and inhibitors [BR:
sjo01002
]
Cysteine peptidases
Family C64
128372943 (tnfaip3)
Ubiquitin system [BR:
sjo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
128372943 (tnfaip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-A20
OTU
Motif
Other DBs
NCBI-GeneID:
128372943
NCBI-ProteinID:
XP_053189127
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All DBs
Position
14:12377551..12390660
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AA seq
825 aa
AA seq
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MSQGQNFLPKFLFVSNLLKAVKIRQRVPNDVVKPAANGGVMHHLRGMHRYTLEMIAMNHF
PQAFREVVQAAILDRAMQASLEQEKKLNWCREVKKMVPLRTNGDGNCLLHAASQYMLGVQ
DTDLVLRKALHGVLKETDTGVFRARFQAELLQSQEFTQTGLRYTTMNWEEEWEKIVKMAS
PVSSSNGLQFDSLEDIHIFVLSNILRRPIIVIADQVVRSMKSGSSISPLNVGGIYLPLHW
PPTECYKYPIVLGYDSQHFAPLITIKDSGPEIRAVPLINPGRGGFEELKVHFLMEKEQPQ
KERLLKDYLLLIEIPVIGLGYDATRIINAARLDEGNLPEDMNLMEDYLQLVNHEYQRWQE
DKEQAWAAQPQRPPPFSVSQLSLIEIRCATPRCTFYVSVDTQPHCHECFEKRQATTGGGT
RIEGVVQTKGGGVQGGVGVIGGSETEVSSRGARSSSPPSSSSGRGVVLSSPRPAPPTAPS
LSLYSETHAMKCKTPGCLFTLSVEHDGLCERCFNSRQNHGPPGAGTAATGLPGPNGGPIA
PHPGQGSGWTQWGGCETETERCSMCRQEAFRIFNGLCPPCMQRQQAPERGEPQQNNPRTE
TTSSAWSQTRDPERPCLTLTQGHTSAWQAPLARPCKRSGCQFFGTPEKLGFCTICYVDYQ
TNHHLTPPPAPVQNRHGLEAGFQNASRCRGPGCGAVGKAMLEGYCDKCYVKEQSTRLNQV
AHRTPHSPPLVMRDRAAKPRSSQQSQTQTQIQCRRSGCSNVSPGCTDLCPECHTRGQGRE
AGRRAQAPKEKSKQRCRTQGCDHYANQEKQGYCNECDHFKQIYRG
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagggtcagaacttcctccccaaattcctgtttgtgtccaacctgctgaaggca
gtgaagatccgtcagcgagtgcccaatgacgtggtgaaaccggctgccaacggtggcgtg
atgcaccacttgcggggtatgcaccgatacactctggagatgatcgccatgaaccacttc
ccgcaggccttcagggaggtagtgcaagctgccatcttagaccgagccatgcaggcgtct
ttggagcaggagaagaagctcaactggtgtcgggaggtgaagaagatggttcccttacgt
acaaatggagatgggaattgtttgctccatgcagcctctcagtacatgctgggcgttcag
gacacagacctggtgcttcggaaagccctccatggtgtattgaaagagacagacactggt
gtctttcgggcccgtttccaggcagagctgctccagtctcaggagttcactcagaccgga
ctccgatacaccaccatgaactgggaggaggagtgggaaaagattgtgaagatggcgtct
ccggtctccagtagcaatggcctccagtttgactctctggaggacatccacatctttgtc
ctctccaacattctccgcagacccatcatcgtcattgcagaccaggtggtcaggagtatg
aaatctggctcctccatctctcctctgaatgttggtgggatttatttgccgttacactgg
ccacctactgagtgctacaaatacccaatagtgctcggctacgactcccagcactttgca
cctctcattaccatcaaagacagtggtccagagatccgagcagtaccgctgattaaccca
ggtcgcgggggctttgaggagctgaaggttcacttcctgatggagaaagaacagccacag
aaagagaggcttctaaaagactatttgctgcttatagagatccctgtcataggcttgggc
tacgatgcgacacggatcatcaatgctgcacggttggatgagggcaacctccctgaagac
atgaacctgatggaggactacctacaactggtcaaccatgagtaccagcgctggcaggag
gacaaggagcaggcgtgggcagcccagccgcagcgcccgccacccttctccgtctcccag
ctatccctcattgaaatccgctgtgccacaccacgatgcaccttctacgtctctgtggac
acacagcctcattgccatgagtgctttgagaagcgacaggccactactggtggaggaacg
aggatagaaggggtggtgcagaccaaaggaggaggtgtacaaggtggggtaggagtgata
gggggatcagagactgaggttagctccaggggagcccgaagcagtagccccccatcctcc
tcatctggaagaggggtggtgttatccagtccccgccccgccccacccactgctcccagc
ctcagcctgtacagtgaaactcatgctatgaagtgcaagacacccggctgcctctttacc
cttagtgtggaacatgatggactttgtgagcgctgtttcaactccaggcagaatcatgga
ccccctggtgctggaacggctgctacgggactcccaggccccaatggggggcctatagcc
cctcatccgggccagggctccggctggacccagtgggggggctgtgagacagagacagag
cgctgtagcatgtgcagacaggaggcgttcaggatattcaatggcctgtgtccaccctgc
atgcagagacagcaagctccagagaggggagagccacagcaaaacaaccccaggactgag
accacgtcttcagcttggagccagacaagggacccggaacggccgtgcctcaccctaacc
caagggcacacctcagcctggcaggcccctctggcccggccttgtaaaagatctggctgc
cagttctttgggacgccagagaagttgggtttctgcactatttgctacgtagactatcag
accaaccaccacctgacccctccccctgccccggtccagaaccggcatggtttggaggca
ggcttccaaaacgcctcacggtgtcgtgggcctgggtgtggtgcggttggcaaggcaatg
ctggagggctactgcgacaagtgctacgtcaaagagcaaagcacacggcttaaccaagtg
gcacatcgcacaccacactcccctcctttggtcatgcgtgaccgagcagctaaacccaga
tcttcacagcaatcccagacccagacccagattcagtgccggcgaagtggctgcagtaat
gtgtccccgggttgcacagacctctgcccagaatgccacacacgtggccaaggcagagaa
gcgggcaggcgggcgcaggcgcccaaggagaagtctaagcagcggtgccggacgcagggc
tgcgaccactacgcgaaccaagagaaacagggctactgcaacgagtgtgaccatttcaaa
cagatttaccgcggctga
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