Scomber japonicus (chub mackerel): 128373017
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Entry
128373017 CDS
T09718
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04060
Cytokine-cytokine receptor interaction
sjo04672
Intestinal immune network for IgA production
sjo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128373017 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
128373017 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
128373017 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sjo04052
]
128373017 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
sjo00536
]
128373017 (cxcl12a)
Cytokines and neuropeptides [BR:
sjo04052
]
Cytokines
Chemokines
128373017 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
sjo00536
]
Heparan sulfate / Heparin
Chemokines
128373017 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
128373017
NCBI-ProteinID:
XP_053189213
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All DBs
Position
14:complement(19379795..19387065)
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AA seq
98 aa
AA seq
DB search
MDVKLLAVVAALTFLTYAPPSQAKPLGMVERCSCRSTVNNLPRGHIRELKFIHTPNCPFQ
VIAKLKTNKEVCVNPETPWLQRYLKNAIKKMKQYKPGN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaagctgctggcagtcgtggctgcgcttactttcttgacatatgcgcctcca
tcacaagcgaagcccctcggtatggtggagagatgctcctgccgttcaacagtcaataac
ctccctcgaggccacatccgagagctcaagttcatccacacgcccaactgccccttccaa
gtgattgccaagctgaagacaaacaaagaggtgtgcgtgaacccagagaccccatggttg
cagagatacttgaagaatgccattaagaagatgaagcaatacaaaccgggcaactaa
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