Scomber japonicus (chub mackerel): 128373337
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Entry
128373337 CDS
T09718
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128373337 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128373337 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
128373337 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
TB
cEGF
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
128373337
NCBI-ProteinID:
XP_053189603
LinkDB
All DBs
Position
14:33517029..33654809
Genome browser
AA seq
1466 aa
AA seq
DB search
MAWIRWGLLLCFGVFLSPVCVSAEQQQSQSGFRRLYVLQPGPGPGSGPGSVGADGGVRVS
SISTRHGSAGQPHTYNVELTANFGGQVRTRRMGNQAASAPQLSQQQQPVLRHSGQEHKQL
MKLSGVNVCGGQCCHGWSKAQGSQRCTKPNCLPQCQNGGMCLRPQLCVCKPGSNGKACEQ
KTVPTHPFPALPGNGPTNGHTTGHTNGHNVVPQRPIPQQAPPNGYASASPPSNNMGQMKL
TVKAAPQLVRPHYIQQHIQQQIRPVPMHPGQSQQYVIKPKYYHTHTTHTQTHVQSQPERP
IPLAVGHNPIHASLGNHTGRIKVVFTPTICKLTCIGGRCHNNCELGNTTTIISENGHATD
TLTAPNFRVVVCHLPCINGGKCSARDKCQCPPNFTGKFCQMPVQTGHQQHQQTAGGYSQT
QVHSTHTLPLTYSNGQSPVFSPGIVNIHIKHPPEASVQVHQVSQLDNFHNNGHKVKGSQS
GSSSTSYTYHHTESSQKIQHHGYNIVYPSQHGYQVPQYQPVTSKNTLGRCFQETAGSQCG
KALPGLTKQDQCCGTIGTSWGFHKCQKCPKKPSIPLIDCPQGYKRINSSHCQDLDECQLQ
GVCPNGNCLNTLGSYRCMCKPGYIPDPTLTTCISNTPAIQEEKGACFRLVSSGRQCLHPV
SAQLSKQLCCCSVGKAWGPRCDKCPPPGTAKFKEICPGGMGYTVLPNPPVNKPVYQEPVY
VIPPQPLPTTVRLVEDFGKPDDIIPEVFVRTSPPAPVEILPSNAGQDIAPTQSAEVDECQ
IDPYICGMGICYNTAEGYTCHCNEGSRLDDAQTTCVDIDECVNRTVCPSGICFNEPGGYN
CGSCSHGFLAQGGQCVDIDECQDQRVCTRGHCQNTDGSFICQCGPGFRVSPAGDQCDDVD
ECLEEARPCEAIGECVNNMGSYTCTCPQGYRQIQGTSCRDVDECVDEPELCSPHGECLNT
EGSYLCVCESGFTANLDTPSCDDIDECGLNETLCGPHGFCENRLGSFRCLCDQGYQESQD
GHGCMDVNECELLSSVCGEAQCVNADGSFFCVCPSGQEYNVMVAKCEAVPTASSVERKEC
YFRMNNENLCESVLTSHVTLQECCCTLGAGWGDNCEVYPCPVNGTDQFNQMCPSGRGFIP
SGDSLYEVPTADSYKNADECTLFGQEVCKGGFCHDTVGSYECYCKTGQDYDPAKMECQDI
NECLDESVCVDGECMNTDGSYVCFCTHPMLLDPNTNRCVFLPEAPEQHEAEMVDYQGICW
QTVTESLTCTQPLGEDRKTTYTECCCLYGEGWGMDCALCPPRNTEDYASMCNLPMGAGGR
RAYGQDALVAGPIHEYEVSPDYSPSPEQQGVLPYYENEEHPYKAFEGLRAEECGILNGCE
NGRCVRVQEGYTCDCFDGYTLDLSRMACIDVNECLELNNRMSLCKNAKCINTVGSYQCVC
LPGFTASDKPNYCVEAATHQTSTHTQ
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atggcttggattagatggggcctcttactttgcttcggtgtgtttctctctccggtgtgt
gtgtcagcggagcagcagcagagccagagcggcttcaggaggctgtacgtgttgcagccc
gggccggggccggggtcgggtccggggtcggtgggagcggacggcggggtgagagtcagc
tccatctcgacgcgtcacggctcggcggggcagcctcacacttacaacgtggagctcacc
gctaacttcggcggccaggtccggacccgcaggatggggaaccaagcagcttcagccccg
cagttgagtcagcagcagcagccggtcctcaggcacagcggacaggagcacaagcagctg
atgaagctgtctggggtgaatgtctgtggagggcagtgctgtcacgggtggagtaaagct
cagggatcgcagcggtgcacaaagcccaactgcctccctcagtgccagaacggaggaatg
tgcctgaggcctcagctctgtgtctgcaagcctggctcaaatgggaaggcatgcgaacag
aagacggtgcccacacacccctttccagcactgcctgggaatggacccaccaacggccac
accaccggtcacaccaacgggcacaatgtggtgccccagcggccaatacctcagcaagcg
cctcctaatggctatgcgtccgcctcccctccatctaacaacatgggccagatgaaacta
actgtcaaggcggccccccagctcgtacgaccgcattacatccagcagcacattcagcaa
cagatccggcccgtgcccatgcacccaggccagagccagcagtatgttataaagcccaaa
tactaccacacacacaccacgcacacacagacgcacgtccagtcccaacctgagaggccg
atccccctggcagtgggacacaaccccatccatgcttcattgggcaaccatacaggaagg
atcaaggtggtcttcacacccactatctgcaaattaacctgtataggaggcagatgtcac
aacaactgcgagctgggaaacaccaccaccatcatcagtgagaacggccatgcgacagac
accctgacagcacccaacttcagagtagtggtgtgtcacctgccgtgtataaatggcggc
aagtgcagcgccagggataaatgccagtgcccccccaacttcaccggaaagttctgccag
atgccggttcagaccggacaccagcagcaccagcagacagcaggtggctacagtcaaact
caggttcactctacacacactctgcctctgacctacagcaacggccagagccctgtgttc
agcccaggcattgtcaacatccacatcaagcatcctccagaggcgtctgtccaggtccac
caggtgtctcagctggacaacttccacaacaatggacacaaggtgaagggttcccagtcc
ggctcttcatccaccagctacacctaccaccacacagagagcagccagaagatccagcac
catggttacaacatagtttatcccagtcagcatggctaccaggttccccagtaccagccc
gtcacctccaagaacacactgggccgctgcttccaggagacggcagggagtcagtgtgga
aaggctctgccaggtctcacaaagcaggaccagtgctgtgggaccattgggacatcctgg
ggtttccacaaatgccagaaatgtccaaaaaaaccatccatacctctgatcgactgtcct
cagggttataagagaatcaacagctctcattgccaagatttggatgagtgccagctacag
ggtgtgtgtccgaatggaaactgtctgaacaccttgggcagttacaggtgtatgtgtaaa
cctggctacatccccgaccccacgctcaccacgtgtatatccaacacgcctgccatccaa
gaggagaagggggcttgcttccgtttggtcagctcagggagacagtgtttgcacccagtg
tctgcccagctgagcaaacagctctgctgctgcagtgtgggcaaagcctggggtcctcgt
tgtgacaaatgtccccctccaggaacagctaagttcaaagagatctgtccaggtggaatg
ggctacactgttctaccaaatccacctgtcaataagccagtttaccaggagcccgtttat
gtaatacctcctcaacccctgccaaccacagtgagactagtggaggactttgggaaacca
gacgacattataccagaggtttttgtgaggacctctcctcctgccccagtggagatcctc
ccatctaatgcaggccaagacattgctccaacccagtcagctgaggtggatgagtgccag
atcgacccttacatttgtggtatggggatttgttacaacacggccgagggctacacctgc
cactgtaatgagggttcccgtctggatgatgcccaaaccacctgtgtcgatatcgatgaa
tgtgtaaacaggacagtgtgtccttctggtatctgcttcaacgagccaggaggttacaac
tgtggctcctgctcgcatgggttcctggcacagggcggccaatgtgtagatatagatgag
tgccaggatcagcgagtgtgcaccagaggccactgccagaacactgatggctccttcatc
tgtcagtgtgggccgggcttcagagtgtcgccagctggagaccagtgtgatgatgtggat
gagtgtttagaggaagccaggccctgcgaggccattggcgaatgcgttaacaacatgggc
tcctacacctgtacctgcccccaggggtaccgacagatccaaggcaccagctgcagagat
gttgatgagtgtgtggatgagccagagctttgttcccctcacggcgagtgcctcaacaca
gagggatcctatctatgtgtgtgcgagagcggattcactgctaacctagacacgccctcc
tgtgatgatatcgatgagtgtggactcaatgagactttgtgtggtcctcatggcttctgt
gagaacagactgggttccttcagatgcctctgtgaccagggctaccaggagtcccaggat
ggccatggctgtatggacgtgaacgagtgtgaacttctgagcagtgtgtgtggagaagct
cagtgtgtgaacgccgacggctccttcttctgcgtgtgtcccagcggccaggagtacaac
gtcatggtcgctaagtgcgaggccgtccccacagcctcatcggtggagcgtaaggagtgc
tacttccgtatgaacaatgagaacctgtgtgagagcgtgctgaccagccacgtcaccctg
caggagtgctgctgcacgctgggagctggctggggagacaactgcgaggtttatccctgt
cctgtcaacggcacagatcagtttaaccagatgtgtccatcaggaagaggttttatcccc
agtggagattcgctgtatgaagtaccaacagctgacagctacaaaaatgcagatgaatgt
acactgtttggtcaggaggtgtgtaaaggaggcttctgtcatgatactgtgggcagctac
gagtgttactgcaagactggacaggactacgacccggctaaaatggagtgtcaagatatc
aatgagtgtctggatgagtcggtgtgtgtggatggagagtgtatgaacacagatggctcg
tacgtttgtttctgtacacaccccatgctgctggatcccaacactaaccgctgtgtgttc
cttcctgaggcccctgagcaacacgaggcggagatggtagactaccagggtatctgctgg
cagacggtgacagaatctctgacctgcactcagcctctgggtgaagacaggaagaccaca
tacacagagtgctgctgtctgtatggggaggggtggggcatggactgtgcactgtgtcca
cccagaaacacagaggattacgcctccatgtgtaacctaccaatgggagctggtggacgg
cgtgcatacggtcaggacgccctcgttgccggccccatccatgaatacgaagtgagccca
gactactcaccatcacctgagcagcagggtgtccttccttactacgagaatgaggagcat
ccatacaaggcctttgagggtctgcgagcagaggagtgtgggatactgaatggctgtgag
aatggtcgctgtgtgcgggttcaggagggttacacctgcgactgctttgatggatacacc
ctggacctgtcccgcatggcctgcattgatgtgaacgagtgtttggaactcaacaatcgc
atgtcgctgtgtaaaaatgcaaagtgcatcaacacagtgggctcctaccagtgtgtgtgt
ctgccgggcttcactgcctccgacaaaccaaactactgtgtggaggcagcgacgcaccaa
acatcaacacacacacagtga
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