Scomber japonicus (chub mackerel): 128374428
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Entry
128374428 CDS
T09718
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like
KO
K06751
MHC class I antigen
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04144
Endocytosis
sjo04145
Phagosome
sjo04218
Cellular senescence
sjo04514
Cell adhesion molecules
sjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128374428
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128374428
04145 Phagosome
128374428
09143 Cell growth and death
04218 Cellular senescence
128374428
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128374428
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128374428
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sjo00537
]
128374428
Exosome [BR:
sjo04147
]
Exosomal proteins
Proteins found in most exosomes
128374428
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sjo00537
]
Antigens
128374428
BRITE hierarchy
Motif
Pfam:
MHC_I
C1-set
Ig_3
OppC_N
DUF5385
MHC_II_beta
CD34_antigen
Syndecan
VSP
Motif
Other DBs
NCBI-GeneID:
128374428
NCBI-ProteinID:
XP_053190668
LinkDB
All DBs
Position
15:6111880..6177647
Genome browser
AA seq
365 aa
AA seq
DB search
MKILFFLVLLGLHSAAAVIHSMKNFFTVSSEVPNFPELVAVGMVDDVQIYHYDSNTMRLV
PKQDWMNRVAEDEPQFWKTYTARLFGYQQLFKGYFETLKHRFNQTGGVHIFQWMVGCEWD
DETGDVNGFRQVGYDGEDFLSWDVKTNTWIAPKQQAVITKNSWNNDKSQLAYYKNYLTQE
CPDWLKIYVKYGRSSLMRTELPSVSLLQKTPSSPVSCFATGFYPDRADIFWRKDGEELHE
NVELGEILPNHNGSFQMNVDLNLSSVIPEDWRRYECVFHLSGVKDDIITKLDKAVIQTNW
GKTGDGSDGGFPLGAVIGVVVVLLLLVVGIVGFFIWKKKKGKEGFKPANISDTDSDNSGS
QNPKA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttgttttttctggtcctcctgggtctacacagcgcagcagcagtgattcac
tctatgaagaatttcttcactgtgtcctctgaagtcccaaacttcccagagttagtagct
gttgggatggttgatgatgttcagatatatcactatgacagcaacaccatgagactagta
cccaaacaggactggatgaacagagtcgcagaagatgaacctcagttctggaagacgtac
actgccagattgtttggttaccagcagctcttcaaaggctactttgaaactttaaagcat
cgcttcaaccaaactggaggtgtccacattttccagtggatggttggctgtgaatgggac
gatgagactggagacgttaatggtttcagacaggttggttacgatggagaagacttccta
tcgtgggatgtgaagacaaatacatggatcgctccaaaacaacaggctgtcatcaccaaa
aacagttggaacaatgacaaatcacagttggcatattataaaaactacctcactcaggag
tgccctgactggctgaagatatatgtgaagtacgggaggagctctctgatgagaacagag
cttccctcagtgtctctcctccagaagactccctcctctccagtcagctgcttcgctaca
ggtttctaccctgacagagccgacatattctggaggaaagatggagaggagcttcatgag
aatgtggaacttggagagatcctccccaaccataatggatccttccagatgaatgttgac
ctgaacctttcatcagtcatacctgaagactggaggaggtacgaatgtgtgtttcatctc
tctggtgtgaaggacgacatcatcaccaaactggataaagcagtgattcagacaaactgg
ggcaagactggtgatggaagtgatggaggtttccctcttggtgctgtcatcggagttgtt
gttgtactgctgctcctggtagtcggcatcgttggattcttcatctggaaaaagaagaag
ggaaaggaagggttcaaacctgccaacatttctgacaccgactctgacaactctggatca
cagaatccaaaagcctga
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