Scomber japonicus (chub mackerel): 128374574
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Entry
128374574 CDS
T09718
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain-like
KO
K06751
MHC class I antigen
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04144
Endocytosis
sjo04145
Phagosome
sjo04218
Cellular senescence
sjo04514
Cell adhesion molecules
sjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128374574
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128374574
04145 Phagosome
128374574
09143 Cell growth and death
04218 Cellular senescence
128374574
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128374574
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128374574
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sjo00537
]
128374574
Exosome [BR:
sjo04147
]
Exosomal proteins
Proteins found in most exosomes
128374574
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sjo00537
]
Antigens
128374574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
SH3BGR
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
128374574
NCBI-ProteinID:
XP_053190802
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All DBs
Position
15:2478869..2491927
Genome browser
AA seq
378 aa
AA seq
DB search
MKMRLISVFVLLWTGLTVNSEKHSLMYIYTGFSKPVGLPGIHEFTAMGLLNGRMIDYYDS
DIQRKVHKQDWMKERLHADYWEKGTQSRLIKQQWFKDNIDTLIKRMNQTNDDLHVLQWMV
GCVGETWSHGTIKFFRGVYMYNYDARNFLSFDDARSVWVATADIAVPTKRKWDPDQDLKE
KTKGYLEKECIDWLDKFKVYGKKQMEAAPPPDVYIFTKKTRIESNLMLSCLATGFYPKDI
ILNIKRNDRILTREDGLISSGVRPNGDDTFQRRDSVEILKGDIASFTCEVIHKASRLFVE
KSWNHKVTDEENNMSIIGGEIGGPLFVVVLVAVVLVVLKKRRRLGSVAAAGKRRCDRRAA
AGEEASCSGEKKQKDGCS
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcgtctcatctcagttttcgttcttttgtggacggggctgacagtaaacagc
gagaaacactccctcatgtacatctacaccggcttctccaaacctgttggacttccaggc
atccatgagttcacagctatgggtctgctgaacggcaggatgatcgactactatgacagt
gatatccagagaaaagttcacaagcaggactggatgaaagagcgacttcatgcagactac
tgggagaaaggcacacagtcccgtctgatcaagcagcagtggttcaaagacaacatcgac
accctgataaaacgaatgaatcagaccaacgatgatctccatgttcttcaatggatggtc
ggctgtgtgggtgaaacatggtctcatggcacaattaagtttttccgtggtgtgtacatg
tacaactatgatgcacgaaacttcctgtcctttgatgacgcccgctcggtctgggttgct
accgctgatatagcagtcccaacaaagagaaagtgggatcctgaccaggacctaaaagaa
aagaccaaaggctacctggagaaggagtgtatcgattggttggacaagttcaaggtatat
gggaaaaaacagatggaagctgcccctccaccagatgtctacatattcactaagaaaacc
agaattgagtcaaacctcatgttgagctgcctggccacaggtttctacccaaaagacatc
atccttaacatcaaaaggaacgaccgcattctgactagagaggacgggttgatctcctca
ggcgttcgaccaaatggagacgataccttccaaagaagagacagtgtggagattttaaag
ggtgacatcgcttcattcacatgtgaagtcattcacaaagcatccagactgtttgttgag
aagtcttggaatcataaagttactgatgaagaaaacaacatgagtattattggtggggag
attgggggcccgctctttgttgtggtactcgtggctgtagtactggtggtgttgaagaaa
agaaggagacttggaagtgtcgctgccgccgggaaacggcgatgcgaccgccgagcagca
gccggggaagaggcgagttgttccggggagaagaagcagaaagatggctgcagctaa
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