Scomber japonicus (chub mackerel): 128374820
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Entry
128374820 CDS
T09718
Symbol
babam2
Name
(RefSeq) BRISC and BRCA1-A complex member 2
KO
K12173
BRCA1-A complex subunit BRE
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
128374820 (babam2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128374820 (babam2)
03036 Chromosome and associated proteins [BR:
sjo03036
]
128374820 (babam2)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128374820 (babam2)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
128374820 (babam2)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
128374820 (babam2)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
128374820 (babam2)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
128374820 (babam2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
UL17
Motif
Other DBs
NCBI-GeneID:
128374820
NCBI-ProteinID:
XP_053191010
LinkDB
All DBs
Position
16:24856800..24934494
Genome browser
AA seq
386 aa
AA seq
DB search
MSSMSPEVALHRISPELRPLLCSVVRDGRVGLDSTNCLRVTDLKTGCTSLTPGPCCDRFK
LHIPYAGETLKWDIIFNARYPELPPDFIFGEDAEFLPEPSELPHLVQWDAGNPECLLQLV
KELIQQYHHYQCQRLRESSRLLFEYDSLLEDPNYGRNMEIYAGHKNSWTGEFSARFLLKL
PVDFSNIPVYLLKDTALDPGEDVALLSVSFEDAEATQVFPKLYLSPSIEHALGGSSALHI
PAFPSGGCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKL
TLLLMWKDFCFLVHVDLPLYFPRDQPTLTFQSVYHFTNSGQLYSQVQKSYPYSPRWDGNE
MAKRAKAYFKSFIPQFQEGAFANGKL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatgtcccctgaggtcgcactgcaccggatctctccggagctgcggcccctg
ctgtgtagcgtggttcgggacggccgtgtgggactggactccaccaactgtctccgtgtc
acagacctcaaaactggatgtacatctctgacccccggtccctgctgcgatcgctttaaa
cttcacatcccctacgctggagaaacccttaaatgggatatcatatttaatgcacggtat
ccggaattgcctccagattttatttttggagaagacgctgagtttctccccgaaccttcg
gaattaccgcacttggtccagtgggatgctgggaacccagaatgtttgctccagctggtg
aaggagcttatccagcagtaccaccactaccagtgccagcgtctccgtgaaagctccagg
ctgctctttgagtacgacagtctgctggaggatcccaactatggccgcaacatggagatc
tatgccggccacaagaacagctggacgggagagttttcagcccgtttcctcctcaaactc
cccgtggacttcagcaacatcccagtctatctcctcaaggacacagcgctggacccggga
gaggatgtggcccttctgtcagtgagctttgaggatgctgaagctacacaagtcttccct
aaactctacctttcaccaagcatcgaacatgctctgggaggctcctctgcacttcatatc
ccagcattccccagtggagggtgcctaattgactatgtcccccaagtgtgccagttactc
accaacaaggtgcagtatgtcatccaaggctatcacaagaggagggagtacatcgctgcg
ttcctcagccactttggaacgggagtggtggagtacgatgcagagggattcacaaaacta
acacttctactcatgtggaaggacttttgcttcctagtgcatgtggatctccccctgtac
ttccccagggaccagcccaccctcaccttccagtctgtttaccacttcaccaacagcggt
cagctctattctcaggtgcagaagtcgtatccctacagcccacgctgggacggcaatgag
atggccaagagggcaaaggcatacttcaagagcttcatccctcagttccaagagggagcc
tttgccaatgggaaactctag
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integrated database retrieval system
