KEGG   Scomber japonicus (chub mackerel): 128374871
Entry
128374871         CDS       T09718                                 
Name
(RefSeq) otoferlin-like
  KO
K19949  otoferlin
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sjo04131]
    128374871
Membrane trafficking [BR:sjo04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    128374871
SSDB
Motif
Pfam: C2 FerB Ferlin_C dsrm_Ferlin FerI FerA
Other DBs
NCBI-GeneID: 128374871
NCBI-ProteinID: XP_053191078
LinkDB
Position
16:9440911..9455084
AA seq 1790 aa
MKRSKHRGHKEDRNGDEPAILETENLDRKFMGGGPDPDSISLASVTAVTTNVSNKRSKPD
IKMEPSSGRPVDYQVSVTVIEARQLVGLNMDPMVCVEIGEDKKYTSMKESTNCPYYNEYF
VFDFHVPPDVMFDKILKLSVIHSKNLLRSGTLVGTFKLDVGTIYGQPEHQFYHKWALLTD
PDDITAGCKGYIKCDVAVVAKGDTIKTPHKANESDEDDIEGNLLIPEGVPAERQWARYYL
KIYKAEGLPRMNTSIMANVKKAFIGENKDLVDPYVQVLFAGQKGKTSVQKSCYEPIWNEQ
IVFTEMFPPLCKRMKIQIRDSDKVNDVAIGTHFLDLRKISNDGDKGFLPTLGPAWVNMYG
STRTYTLMDEYQELNEGLGEGVSFRARLLISLGVEILDPSSPEITSSTDVQVEGVPNISE
TATGKVEEFFLFGSFLEATMVDRKIGDKPINFEVTIGYYGNEIDGLAKPQRKGKRDGDEE
ETELIHNSSDEEMDDDSDLTSVATTPPMKPVITDRNYFHLPYFERKPCIYIKSWWQDQRR
RLYNANIIDNIADKLEDGLNDVQEIIKTEKTYPERRLRGVLEELSQGCSQFLSLANKDQN
QSGRTKLDRERLKLCMFEVESIGQQAKAMRSQVKKSTVRDKIKLAQNFLQKLQFLADEPQ
HSVPDVFIWMISNGKRIAYARVPSKDLLYSNIDEERGKDCGKVKTIFLRIPGKKGFGPAG
WTVQSKIEIYLWLGLNRQRKDYLNGLPNGFEENKLSRGPGLPCSPPISLTYMMKQIFQLR
VHMYQARSLFAADSTGLSDPFARVFFSTQSQVTEVLAETLCPTWDQLLVFENVELFGEAS
ELRDDPPIIVIEIYDQDTVGKADFMGRTFAKPVVKMADEHYGPPRFPPQLEYYQIYRGNC
TAGEMLAAFELLQIGPNGKADLPPIEGPTDIDRGPILPVPLGIRPVLSKYRIEVLFWGLR
DLKRVNLAQVDRPRVDIECAGKGVQSALIPNYKKNPNFSTLVKWFEVDLPENELLHPPLN
IRVVDCRAFGRYTLVGSHAVTTLRKFIYRTTDKQANNWSTTEEIIVVNMEPETNYKKMET
VVKLDSCSDAVVKVEDDDKDGKGKKKKRKKGDEADEEELDESMLDWWSKYFASIETLTEA
LKAQEAALSDSEDKDDMDIADGGDIKPDDSPVKGTKRGKGKKEKKKLALDSADRRRPKLD
ELKVYPKELEGDFDNFEDWLHSFNLFRGKGGDDDDQNVADEDRIVGKFKGSMCMYKVSDD
MPRDMSFDSNMGMFQNIPHNDPINILVRIYVIRATDLHPADINGKADPYIAIKLGKTEIK
DKENYISKQLNPLFGKSFDIEATFPMDSTLTVSIYDWDLVGTDDLIGETKLDLENRFYSK
HRATCGVTSNYAIHGYNVWRDPMKPTQILAKLCKEGKLDGPHYGPGGRVKVENRVFMAPT
EIEDENGLKKQTDEHLALTVLKHWEEIPRVGCKLVPEHVETRPLLHPDKPGIEQGRIEMW
VDMFPKDMTAPGPALDISPRKPKKFELRVIVWNTDEVVLEDDDIFTGEKSSDIFVRGWLK
GQQEDKQDTDVHYHSITGEGNFNWRFVYPFDYLMAEEKIVISKKESMFAWDETEYKIPAR
LNLQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCTIEMVTNETEMPMVSIFKQKRIK
GWWPFVARNEEDEFELTGKVEAELHLLTGEEAEKSPVGEGRNEPEPLEKPNRPDTSLLWF
LTPFKAIKHLVCNQYKWLAIKIATALLLLAILAIFLYSMPGYMVKKMLGA
NT seq 5373 nt   +upstreamnt  +downstreamnt
atgaagcgcagtaagcatcgtggacacaaggaggacaggaacggagatgagccagctatt
ttagagacagagaacctggatcgcaagttcatgggaggaggcccagaccctgacagtatc
tcattggcctcagtcacagctgtcaccaccaatgtatcaaacaaaagatcaaaaccagac
ataaagatggaacccagttctggaagaccagtagattatcaagtcagtgtgacagtgatt
gaagccagacagctggtgggtctgaacatggatccaatggtttgcgtggaaattggagaa
gataaaaagtacacctcaatgaaggagtcaaccaactgcccatactacaatgaatatttt
gtgtttgacttccacgtgcctccagatgttatgtttgacaaaatcctgaagttgtctgtg
atccattccaaaaatcttctgcgcagtggaacactagtcggtacttttaaactggacgtt
ggcacaatctatggccaaccagaacatcagttttaccacaaatgggctttgttgactgac
cctgacgatatcacagcagggtgcaaaggctatatcaaatgtgatgttgcggttgtggcc
aaaggagacactataaaaacaccacacaaggctaatgaatctgatgaagatgacatagag
ggcaacctcttgataccagagggggtacctgcagagagacagtgggctcgttattacctg
aagatctacaaagcggagggactccccagaatgaacaccagcatcatggccaacgttaaa
aaggcctttataggagaaaataaggacctggttgatccttatgtccaagtactgtttgct
ggtcagaaggggaaaacatcagtacaaaagagctgctacgagcccatctggaatgagcaa
attgttttcactgagatgtttccaccactttgcaaacgcatgaagatccagatccgcgac
tcagataaagtgaacgatgttgctataggaacacactttctagatctacggaagatttcc
aatgatggggacaaaggcttcctccccacgctgggacctgcctgggtcaacatgtatggc
tccactcgtacctacaccctgatggatgagtaccaggagttaaatgaagggctcggtgag
ggggtgtcctttagggcccgtctattgatcagcttgggtgtggagatacttgacccctcc
tcacctgagattaccagctccacagacgtgcaggtggagggagtgcccaacatctcagag
actgcaactgggaaggttgaggaatttttcctgtttggttcattccttgaggccacaatg
gttgacaggaagattggagataagcccatcaactttgaggtcaccataggttactatgga
aacgagattgatgggcttgccaagccacaaagaaaagggaagcgggatggagacgaagaa
gaaactgaactgatccataactctagtgatgaggagatggacgatgacagcgacctgact
tcagttgcaactactcctcccatgaaacctgtcatcactgaccgaaactatttccacctg
ccgtattttgagaggaagccatgtatctacatcaagagttggtggcaggaccagagacgg
aggctgtacaatgccaacatcatagacaacattgcagataaattggaggatggactgaat
gatgtgcaagagatcatcaagacagaaaaaacttatcctgagcgcaggcttagaggtgtc
cttgaggagctcagccagggatgcagtcagttcctttcgctggcaaacaaggaccagaat
cagtcgggcagaaccaaacttgacagagagagactgaagctgtgcatgttcgaagtggag
agcataggccagcaagctaaagccatgagatcacaggtgaaaaaaagcacagtgagagat
aaaatcaagctggctcagaacttcctccaaaagctgcagttcctggctgatgaaccccaa
cacagcgttcctgatgttttcatttggatgataagtaatgggaagcgtattgcttatgca
cgcgttccctccaaagacctcctttactctaatatagatgaggaaaggggaaaggactgt
gggaaagtgaaaacaatctttctgaggatcccaggtaagaaaggttttgggcctgctgga
tggacagtgcagtccaagatagagatttatctgtggctgggtctgaataggcagcgcaaa
gactacctgaatggtctgcccaatggatttgaggaaaataagttgtccagaggacctggc
ctgccgtgctcaccacccatcagcctcacctacatgatgaaacagatcttccagctgagg
gtccacatgtaccaggctcgcagcctgtttgcagctgacagcacaggattgtctgatccc
tttgcaagagtcttcttctcaacacaaagccaagtcactgaggtgctggctgagactctc
tgcccaacttgggaccagctgctggtttttgagaatgtggagctgtttggagaggccagc
gagctgcgagacgaccctcctattattgtgatcgaaatctacgatcaagacacagtgggt
aaagctgacttcatgggcagaacttttgccaagcctgtggtcaagatggcggacgagcac
tacggccccccacgcttccctcctcaactggagtactatcagatctaccgtgggaactgc
acagctggagaaatgttggcagcttttgagctgttgcagattggccccaatgggaaagct
gacctgccaccaatagaaggtcctacagatatagaccgtggcccaatcctgcctgttccc
ctgggaatcagaccagtgctcagcaagtacaggattgaggtgttgttctggggcttgaga
gacttgaagagggtgaatctcgctcaggtggaccggccccgtgtggacattgaatgtgcc
ggcaagggagtgcagtctgccctcatccccaactacaagaaaaaccccaacttcagcacc
cttgtcaagtggtttgaagttgatttgccggagaatgagttgcttcacccgcctctgaac
atccgagtggtggactgcagggcttttggccgctacactctggttggctcccatgccgtt
accaccctgcggaagttcatctacaggacaacagacaagcaggccaacaactggtccact
acggaggaaattattgttgtcaacatggagcccgagactaattataagaagatggaaact
gtggtcaaactagactcttgctccgatgctgtggtcaaagttgaggatgatgataaggac
ggaaaggggaaaaagaagaagaggaagaagggtgatgaggctgacgaagaggaacttgac
gagagcatgctggactggtggtccaaatatttcgcctccattgaaactttgacagaggcg
cttaaggcccaagaggcagctctctcagattcagaggacaaagacgacatggacattgca
gatggtggagatatcaaacctgatgactctcctgtgaaaggcaccaagagaggaaaagga
aagaaggaaaagaagaagctagcacttgattcggcagataggagaaggccaaagctggat
gagctaaaggtgtatcccaaggaactggagggtgactttgacaactttgaggactggctg
cacagttttaacctgttcaggggaaagggtggcgatgacgatgaccaaaatgtggctgat
gaagacaggattgttggaaaattcaaaggctcaatgtgcatgtacaaagtgtcggatgat
atgcccagagacatgagctttgactccaacatggggatgtttcagaacatccctcacaac
gatccaattaacatcctcgtccgcatctatgtcatcagggcaactgatctgcatccagca
gacattaacgggaaagctgacccgtacattgcaatcaaactgggaaagactgagatcaaa
gacaaagagaactacatttccaaacagctgaaccctttgtttggcaagtcttttgacatt
gaagctacattcccaatggattccacactaacggtgtcgatttatgactgggatctggtg
gggactgatgatctgattggagaaaccaaactcgaccttgagaaccgcttctacagcaaa
cacagagccacatgcggtgtcacgagtaactacgccatccatggttacaatgtttggagg
gacccgatgaaacccacacagatcctggctaagctgtgcaaggagggcaaactggatggg
cctcactacggccccggaggaagagtgaaggtggagaaccgtgtcttcatggcaccgact
gagatcgaggatgaaaatggtctgaagaagcagacagatgaacatctggctctgaccgtg
ttgaagcactgggaggaaatcccgcgggtcggatgcaaacttgtcccagaacatgtggag
accagaccacttctgcaccctgataaaccaggaattgaacaagggagaattgagatgtgg
gtggatatgttccctaaggatatgactgcacctggtcctgcccttgacatttcaccacgg
aaaccgaagaagtttgaactgagggtgatcgtttggaacacagatgaggttgtcctagag
gatgatgatatcttcactggagagaaatcaagtgacatttttgtgagaggttggctgaaa
ggacagcaagaggacaagcaggacaccgatgtccattaccactccattactggggaaggc
aacttcaactggcgtttcgtctaccccttcgactacctcatggctgaagagaaaatcgtc
atctctaaaaaagagtccatgtttgcctgggatgagaccgagtacaagatcccagctcgt
ctgaatctgcaagtgtgggacgctgatcacttttcagcagatgacttcttaggtgcgatt
gagctggacctgaaccgtttcccgcgtggtgctaagactgccaagcagtgcaccattgag
atggtgacaaatgaaacagagatgcccatggtctccatcttcaaacagaagaggatcaaa
ggctggtggccatttgtggccagaaatgaagaagatgagtttgaactcacgggcaaagtg
gaagcagaactgcaccttctgacaggagaggaggctgagaaaagccccgttggtgaagga
cgcaatgaaccagagccactggagaaacccaaccgtccagacaccagccttctgtggttc
ctcactcccttcaaagccataaaacatttggtctgcaaccagtacaagtggctggccatc
aagattgccacagctctcctgctgctagccatactagccattttcctttacagcatgcct
ggttacatggtcaagaaaatgctgggcgcttga

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