Scomber japonicus (chub mackerel): 128374871
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Entry
128374871 CDS
T09718
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128374871
Membrane trafficking [BR:
sjo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128374871
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
FerA
Motif
Other DBs
NCBI-GeneID:
128374871
NCBI-ProteinID:
XP_053191078
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All DBs
Position
16:9440911..9455084
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AA seq
1790 aa
AA seq
DB search
MKRSKHRGHKEDRNGDEPAILETENLDRKFMGGGPDPDSISLASVTAVTTNVSNKRSKPD
IKMEPSSGRPVDYQVSVTVIEARQLVGLNMDPMVCVEIGEDKKYTSMKESTNCPYYNEYF
VFDFHVPPDVMFDKILKLSVIHSKNLLRSGTLVGTFKLDVGTIYGQPEHQFYHKWALLTD
PDDITAGCKGYIKCDVAVVAKGDTIKTPHKANESDEDDIEGNLLIPEGVPAERQWARYYL
KIYKAEGLPRMNTSIMANVKKAFIGENKDLVDPYVQVLFAGQKGKTSVQKSCYEPIWNEQ
IVFTEMFPPLCKRMKIQIRDSDKVNDVAIGTHFLDLRKISNDGDKGFLPTLGPAWVNMYG
STRTYTLMDEYQELNEGLGEGVSFRARLLISLGVEILDPSSPEITSSTDVQVEGVPNISE
TATGKVEEFFLFGSFLEATMVDRKIGDKPINFEVTIGYYGNEIDGLAKPQRKGKRDGDEE
ETELIHNSSDEEMDDDSDLTSVATTPPMKPVITDRNYFHLPYFERKPCIYIKSWWQDQRR
RLYNANIIDNIADKLEDGLNDVQEIIKTEKTYPERRLRGVLEELSQGCSQFLSLANKDQN
QSGRTKLDRERLKLCMFEVESIGQQAKAMRSQVKKSTVRDKIKLAQNFLQKLQFLADEPQ
HSVPDVFIWMISNGKRIAYARVPSKDLLYSNIDEERGKDCGKVKTIFLRIPGKKGFGPAG
WTVQSKIEIYLWLGLNRQRKDYLNGLPNGFEENKLSRGPGLPCSPPISLTYMMKQIFQLR
VHMYQARSLFAADSTGLSDPFARVFFSTQSQVTEVLAETLCPTWDQLLVFENVELFGEAS
ELRDDPPIIVIEIYDQDTVGKADFMGRTFAKPVVKMADEHYGPPRFPPQLEYYQIYRGNC
TAGEMLAAFELLQIGPNGKADLPPIEGPTDIDRGPILPVPLGIRPVLSKYRIEVLFWGLR
DLKRVNLAQVDRPRVDIECAGKGVQSALIPNYKKNPNFSTLVKWFEVDLPENELLHPPLN
IRVVDCRAFGRYTLVGSHAVTTLRKFIYRTTDKQANNWSTTEEIIVVNMEPETNYKKMET
VVKLDSCSDAVVKVEDDDKDGKGKKKKRKKGDEADEEELDESMLDWWSKYFASIETLTEA
LKAQEAALSDSEDKDDMDIADGGDIKPDDSPVKGTKRGKGKKEKKKLALDSADRRRPKLD
ELKVYPKELEGDFDNFEDWLHSFNLFRGKGGDDDDQNVADEDRIVGKFKGSMCMYKVSDD
MPRDMSFDSNMGMFQNIPHNDPINILVRIYVIRATDLHPADINGKADPYIAIKLGKTEIK
DKENYISKQLNPLFGKSFDIEATFPMDSTLTVSIYDWDLVGTDDLIGETKLDLENRFYSK
HRATCGVTSNYAIHGYNVWRDPMKPTQILAKLCKEGKLDGPHYGPGGRVKVENRVFMAPT
EIEDENGLKKQTDEHLALTVLKHWEEIPRVGCKLVPEHVETRPLLHPDKPGIEQGRIEMW
VDMFPKDMTAPGPALDISPRKPKKFELRVIVWNTDEVVLEDDDIFTGEKSSDIFVRGWLK
GQQEDKQDTDVHYHSITGEGNFNWRFVYPFDYLMAEEKIVISKKESMFAWDETEYKIPAR
LNLQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCTIEMVTNETEMPMVSIFKQKRIK
GWWPFVARNEEDEFELTGKVEAELHLLTGEEAEKSPVGEGRNEPEPLEKPNRPDTSLLWF
LTPFKAIKHLVCNQYKWLAIKIATALLLLAILAIFLYSMPGYMVKKMLGA
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagtaagcatcgtggacacaaggaggacaggaacggagatgagccagctatt
ttagagacagagaacctggatcgcaagttcatgggaggaggcccagaccctgacagtatc
tcattggcctcagtcacagctgtcaccaccaatgtatcaaacaaaagatcaaaaccagac
ataaagatggaacccagttctggaagaccagtagattatcaagtcagtgtgacagtgatt
gaagccagacagctggtgggtctgaacatggatccaatggtttgcgtggaaattggagaa
gataaaaagtacacctcaatgaaggagtcaaccaactgcccatactacaatgaatatttt
gtgtttgacttccacgtgcctccagatgttatgtttgacaaaatcctgaagttgtctgtg
atccattccaaaaatcttctgcgcagtggaacactagtcggtacttttaaactggacgtt
ggcacaatctatggccaaccagaacatcagttttaccacaaatgggctttgttgactgac
cctgacgatatcacagcagggtgcaaaggctatatcaaatgtgatgttgcggttgtggcc
aaaggagacactataaaaacaccacacaaggctaatgaatctgatgaagatgacatagag
ggcaacctcttgataccagagggggtacctgcagagagacagtgggctcgttattacctg
aagatctacaaagcggagggactccccagaatgaacaccagcatcatggccaacgttaaa
aaggcctttataggagaaaataaggacctggttgatccttatgtccaagtactgtttgct
ggtcagaaggggaaaacatcagtacaaaagagctgctacgagcccatctggaatgagcaa
attgttttcactgagatgtttccaccactttgcaaacgcatgaagatccagatccgcgac
tcagataaagtgaacgatgttgctataggaacacactttctagatctacggaagatttcc
aatgatggggacaaaggcttcctccccacgctgggacctgcctgggtcaacatgtatggc
tccactcgtacctacaccctgatggatgagtaccaggagttaaatgaagggctcggtgag
ggggtgtcctttagggcccgtctattgatcagcttgggtgtggagatacttgacccctcc
tcacctgagattaccagctccacagacgtgcaggtggagggagtgcccaacatctcagag
actgcaactgggaaggttgaggaatttttcctgtttggttcattccttgaggccacaatg
gttgacaggaagattggagataagcccatcaactttgaggtcaccataggttactatgga
aacgagattgatgggcttgccaagccacaaagaaaagggaagcgggatggagacgaagaa
gaaactgaactgatccataactctagtgatgaggagatggacgatgacagcgacctgact
tcagttgcaactactcctcccatgaaacctgtcatcactgaccgaaactatttccacctg
ccgtattttgagaggaagccatgtatctacatcaagagttggtggcaggaccagagacgg
aggctgtacaatgccaacatcatagacaacattgcagataaattggaggatggactgaat
gatgtgcaagagatcatcaagacagaaaaaacttatcctgagcgcaggcttagaggtgtc
cttgaggagctcagccagggatgcagtcagttcctttcgctggcaaacaaggaccagaat
cagtcgggcagaaccaaacttgacagagagagactgaagctgtgcatgttcgaagtggag
agcataggccagcaagctaaagccatgagatcacaggtgaaaaaaagcacagtgagagat
aaaatcaagctggctcagaacttcctccaaaagctgcagttcctggctgatgaaccccaa
cacagcgttcctgatgttttcatttggatgataagtaatgggaagcgtattgcttatgca
cgcgttccctccaaagacctcctttactctaatatagatgaggaaaggggaaaggactgt
gggaaagtgaaaacaatctttctgaggatcccaggtaagaaaggttttgggcctgctgga
tggacagtgcagtccaagatagagatttatctgtggctgggtctgaataggcagcgcaaa
gactacctgaatggtctgcccaatggatttgaggaaaataagttgtccagaggacctggc
ctgccgtgctcaccacccatcagcctcacctacatgatgaaacagatcttccagctgagg
gtccacatgtaccaggctcgcagcctgtttgcagctgacagcacaggattgtctgatccc
tttgcaagagtcttcttctcaacacaaagccaagtcactgaggtgctggctgagactctc
tgcccaacttgggaccagctgctggtttttgagaatgtggagctgtttggagaggccagc
gagctgcgagacgaccctcctattattgtgatcgaaatctacgatcaagacacagtgggt
aaagctgacttcatgggcagaacttttgccaagcctgtggtcaagatggcggacgagcac
tacggccccccacgcttccctcctcaactggagtactatcagatctaccgtgggaactgc
acagctggagaaatgttggcagcttttgagctgttgcagattggccccaatgggaaagct
gacctgccaccaatagaaggtcctacagatatagaccgtggcccaatcctgcctgttccc
ctgggaatcagaccagtgctcagcaagtacaggattgaggtgttgttctggggcttgaga
gacttgaagagggtgaatctcgctcaggtggaccggccccgtgtggacattgaatgtgcc
ggcaagggagtgcagtctgccctcatccccaactacaagaaaaaccccaacttcagcacc
cttgtcaagtggtttgaagttgatttgccggagaatgagttgcttcacccgcctctgaac
atccgagtggtggactgcagggcttttggccgctacactctggttggctcccatgccgtt
accaccctgcggaagttcatctacaggacaacagacaagcaggccaacaactggtccact
acggaggaaattattgttgtcaacatggagcccgagactaattataagaagatggaaact
gtggtcaaactagactcttgctccgatgctgtggtcaaagttgaggatgatgataaggac
ggaaaggggaaaaagaagaagaggaagaagggtgatgaggctgacgaagaggaacttgac
gagagcatgctggactggtggtccaaatatttcgcctccattgaaactttgacagaggcg
cttaaggcccaagaggcagctctctcagattcagaggacaaagacgacatggacattgca
gatggtggagatatcaaacctgatgactctcctgtgaaaggcaccaagagaggaaaagga
aagaaggaaaagaagaagctagcacttgattcggcagataggagaaggccaaagctggat
gagctaaaggtgtatcccaaggaactggagggtgactttgacaactttgaggactggctg
cacagttttaacctgttcaggggaaagggtggcgatgacgatgaccaaaatgtggctgat
gaagacaggattgttggaaaattcaaaggctcaatgtgcatgtacaaagtgtcggatgat
atgcccagagacatgagctttgactccaacatggggatgtttcagaacatccctcacaac
gatccaattaacatcctcgtccgcatctatgtcatcagggcaactgatctgcatccagca
gacattaacgggaaagctgacccgtacattgcaatcaaactgggaaagactgagatcaaa
gacaaagagaactacatttccaaacagctgaaccctttgtttggcaagtcttttgacatt
gaagctacattcccaatggattccacactaacggtgtcgatttatgactgggatctggtg
gggactgatgatctgattggagaaaccaaactcgaccttgagaaccgcttctacagcaaa
cacagagccacatgcggtgtcacgagtaactacgccatccatggttacaatgtttggagg
gacccgatgaaacccacacagatcctggctaagctgtgcaaggagggcaaactggatggg
cctcactacggccccggaggaagagtgaaggtggagaaccgtgtcttcatggcaccgact
gagatcgaggatgaaaatggtctgaagaagcagacagatgaacatctggctctgaccgtg
ttgaagcactgggaggaaatcccgcgggtcggatgcaaacttgtcccagaacatgtggag
accagaccacttctgcaccctgataaaccaggaattgaacaagggagaattgagatgtgg
gtggatatgttccctaaggatatgactgcacctggtcctgcccttgacatttcaccacgg
aaaccgaagaagtttgaactgagggtgatcgtttggaacacagatgaggttgtcctagag
gatgatgatatcttcactggagagaaatcaagtgacatttttgtgagaggttggctgaaa
ggacagcaagaggacaagcaggacaccgatgtccattaccactccattactggggaaggc
aacttcaactggcgtttcgtctaccccttcgactacctcatggctgaagagaaaatcgtc
atctctaaaaaagagtccatgtttgcctgggatgagaccgagtacaagatcccagctcgt
ctgaatctgcaagtgtgggacgctgatcacttttcagcagatgacttcttaggtgcgatt
gagctggacctgaaccgtttcccgcgtggtgctaagactgccaagcagtgcaccattgag
atggtgacaaatgaaacagagatgcccatggtctccatcttcaaacagaagaggatcaaa
ggctggtggccatttgtggccagaaatgaagaagatgagtttgaactcacgggcaaagtg
gaagcagaactgcaccttctgacaggagaggaggctgagaaaagccccgttggtgaagga
cgcaatgaaccagagccactggagaaacccaaccgtccagacaccagccttctgtggttc
ctcactcccttcaaagccataaaacatttggtctgcaaccagtacaagtggctggccatc
aagattgccacagctctcctgctgctagccatactagccattttcctttacagcatgcct
ggttacatggtcaagaaaatgctgggcgcttga
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integrated database retrieval system