Scomber japonicus (chub mackerel): 128375173
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Entry
128375173 CDS
T09718
Symbol
bcl11ba
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11B a isoform X1
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128375173 (bcl11ba)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
128375173 (bcl11ba)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_16
zf-C2H2_15
zf-H2C2_5
Actin_micro
DUF3268
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
128375173
NCBI-ProteinID:
XP_053191430
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Position
16:26756028..26802157
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AA seq
866 aa
AA seq
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MSRRKQGNPQHLSQREITPEVEHPDGGLLSDSLPPHPLSLPPHPLILPPHPLDPSLAHAL
PPGLHADHDLLTCGQCQMTFPLGDILLFIEHKKKQCQTPLLANGCYDKINDRGGGGGGSP
TLQSLHHHAQRLELRKVLEPVEIGIQVTPEEEEEVEGVRGGGERGARTPIKGICPKQENT
PAGAARFFPVTACSYLRQGGRDEPSSYICTTCKQPFPSAWFLLQHAQNTHGIRIYLESNP
SSTALTPRITMPPPMGNDSIPQSPLTNFLGDNNPFHLLRMTGPLLREPPPSFVESRLPNT
PPFVSPPPRHHLDPHRLERLSAEEMGLISQHPSAFERVMRLTPMAMESQSMDFSRRLREL
AGNNNSTTPPLSPSRANPMHRLLNPNPFQPGPKSPFLSTPPLPPMPPNSTTPPQTQNKVK
SCEFCGKTFKFQSNLVVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMHKAGSLTGR
SDDGLSTTSSPEPGTSDVTGEGMKNRDGDFQGEGNEEEEEEEEEEELENESRPESNFSIE
SEFYRNRENGSKPPSEEKSSLALEKMVEGGGINSIQQYNNLIVDNRKRMPFSKRGMDVQR
DTGDEDSVVGEMEHHHQQEERTTINGRNCGSSDSFSGLFPRKPTPITSPSLSNSSNKRIK
IEKDLDIPPAPHIPSENVYSQWLVGYAASRHFIKDPFLGFTDSRQSPFATSSEHSSENGS
LRFSTPPGDLLDGGLSGRSGTASGGSTPHLGGGGGPGRPSSKDSRRCDTCEYCGKVFKNC
SNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHMKTHGQLGKEVYRCDICQMPFSVYST
LEKHMKKWHGEHLMTNEVKIEQAERT
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacgcaagcaggggaacccacagcacctgtcccagagagaaataacaccagag
gttgagcatccagatggcggcctgctctctgactccctacccccccatccgctcagctta
cccccccacccgctcatcctacctccccaccctctggacccgagcctggcccacgccctt
ccgcccggtctccacgccgaccacgacctgctgacatgcggccagtgccagatgaccttc
ccgctgggcgacatcctcctcttcatcgagcacaagaagaaacagtgccagacgccgctg
ctggccaatggctgctacgataagatcaacgacaggggaggaggaggaggaggaagtccg
actctgcagagccttcatcaccacgcccagcggttggagctgaggaaggtgttggagccg
gtggagatcggcatccaggtgacaccggaggaggaggaggaggtggagggagtgagggga
ggaggcgaaaggggagcgaggacgcccatcaaaggaatttgccccaagcaggagaacaca
ccggcaggagctgctaggttctttcctgttaccgcctgcagctacttgcgccaaggtggc
agagatgagccttccagctatatatgtaccacatgtaagcagcccttccccagcgcctgg
ttcctgctgcagcatgcccagaacacccacggcattcgcatctacctggagtccaacccc
tccagcacagccctcaccccacgcatcactatgcctccacccatgggtaacgactccatc
ccgcagtcccccctcaccaactttctcggggacaacaaccccttccacctcctgaggatg
acgggtcccctgcttcgggagcctcctccgagctttgtggagagccgcctccctaacacg
cctccatttgtcagcccgcctccccgccaccacctggatccccatcggctggaacgcctt
agcgcagaggaaatgggcctcatctcccagcaccccagtgcctttgagcgggtgatgcgc
ctaacgcctatggccatggagtcccagtccatggacttctccaggcggttacgtgagttg
gcagggaacaacaacagcaccacaccaccgctgtcacccagcagggccaaccctatgcac
cgactactaaaccctaacccattccagcctgggcctaaatcgccctttctgagcacccct
cccctacctccgatgcccccgaacagcaccacccctccccagacacaaaacaaggtgaag
tcctgtgagttctgtgggaagaccttcaagttccagagcaacttggtggtgcatcgacgc
agccatactggagaaaaaccatacaagtgccagctgtgtgaccatgcctgctcccaggct
agcaagctgaagcgccatatgaaaactcacatgcacaaggctgggtcgctgacggggcgg
tcggatgatggattgtccaccacgagctcaccggagccgggtactagtgacgtcacaggg
gaggggatgaaaaatcgcgatggagacttccagggggaaggtaatgaggaggaggaagag
gaggaagaagaggaagaactcgagaatgagagtcgaccagaatccaacttcagcattgag
tctgagttctaccgaaacagggagaatggttctaaaccgccctcagaggagaagtcatca
ctcgcccttgagaagatggtggaaggtggagggatcaactctatacagcagtacaataat
ttaatagttgacaatcgtaaaaggatgcccttctccaagaggggcatggatgtccagcgg
gacactggggatgaggactcagtggttggggagatggaacaccaccaccagcaggaagag
aggacaaccattaatggccggaactgtggctccagtgactctttctcaggcctgttcccc
cgtaagcccacccccatcaccagccccagcttgtccaactcctcaaataaaaggatcaag
attgagaaggacttggacattcccccagcaccccacattccttctgagaacgtctactcc
cagtggttggtgggctatgctgcctcacgccacttcatcaaagaccctttcctaggcttc
actgactccagacaatcgcccttcgccacctcctctgagcactcatccgagaatggcagc
ctgcggttctcaacgcctccaggggatctgctggatggtggcctatcaggccgcagtggc
actgccagcgggggcagcacacctcatctgggcggaggaggcggcccaggccgaccgagc
tcgaaggacagcaggaggtgtgacacctgcgagtactgtggcaaggtgttcaagaactgt
agcaacctgacggtgcatcggcgtagtcacactggcgagaggccctacaagtgtgagctg
tgcaactatgcctgcgcccagagctccaagctcacgcgccacatgaagacacatggccag
cttggtaaggaggtctaccgctgtgacatttgccaaatgcccttcagcgtgtacagcact
ctggagaaacatatgaaaaagtggcatggagaacatttgatgaccaatgaggtcaaaatt
gaacaagcagagagaacctaa
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