Scomber japonicus (chub mackerel): 128375196 Help Entry 128375196         CDS       T09718                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism sjo  Scomber japonicus (chub mackerel) Pathway sjo04115   p53 signaling pathway sjo04145   Phagosome sjo04148   Efferocytosis sjo04350   TGF-beta signaling pathway sjo04510   Focal adhesion sjo04512   ECM-receptor interaction sjo04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sjo00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     128375196   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     128375196  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     128375196    04148 Efferocytosis     128375196   09143 Cell growth and death    04115 p53 signaling pathway     128375196   09144 Cellular community - eukaryotes    04510 Focal adhesion     128375196   09142 Cell motility    04820 Cytoskeleton in muscle cells     128375196  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sjo04131]     128375196   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sjo00536]     128375196 Membrane trafficking [BR:sjo04131]  Endocytosis   Phagocytosis    Opsonins     128375196 Glycosaminoglycan binding proteins [BR:sjo00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    128375196 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 cEGF TSP1_ADAMTS EGF_CA TSP1_CFP_C EGF TSP1_CCN Laminin_G_3 Motif Other DBs NCBI-GeneID:  128375196 NCBI-ProteinID:  XP_053191457 LinkDB All DBs Position 16:complement(18626936..18635880) Genome browser AA seq 1172 aa AA seqDB search MMLCGIFLLLMLWSCEGARLAESRDDNSVYDLFDLARVNKRHNGVALVKGADPYSPAYRV LNPDLIPPVPDSSFRDLIDSIQAERGFLLLVNLKQFKKTRGSILTIEKTDGSGPIFEIVS NGKANTLDVIYSTMNQQQLVSIEDANLATGHWKNITLFVQDDRAQLFVGCEEINVSELDV PIYQVLSQEVTNIAKVRIGKGAVKDRFMGVLQNVRFVFGTTLDTVLRNKGCNSGATLTDV MTLDNPVNGSSPAIRTDYTGHKAKDLQSVCGFSCEDIAGMFKELKGLGVVVKQLSNELRK VSEDSTMLKNQMNIHSGICFHNGIVHMDKDEWTVDGCTECTCQNSATICRKISCPLIPCA NATVPDGECCPRCGPPSDEAEDGWSPWSEWTPCSVTCGRGIQQRGRSCDRINSNCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGEG RQTEICQKSPCPINGGWGPWSPWDTCTVTCGGGVQNRKRLCSDPVPKYGGKDCVGDATVS QVCNKQDCPIDGCLSNPCFPGAKCSSSPDGSFRCGRCPPGYTGNGVTCKDIDECKEVPDA CHTHNGVHRCENTEPGYNCLPCPSRFSGPQPFGRGVEQATAKKQVCTPRNPCQDGSHNCN KNANCVYLGIYSESMFRCECKPGYAGNGHICGEDTDLDGWPNTDLLCVENATYHCKKDNC PNLPNSGQEDHDKDGLGDECDHDDDNDGIPDDRDNCEKVYNPAQYDADRDDVGDRCDNCV FEANTDQTDTDNNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDGVGDHCDNCPL EHNPDQIDSDSDRIGDKCDNNQDIDEDGHQNNLDNCPYIANSNQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQLDSDGDGRGDICKDDFDQDNVLDIDDVCPENFAISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFSAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYTVMWKQITQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGDTAGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGLYVFSQEMVYFSDLKYECRDT NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgatgctgtgtggcatctttttgctgttgatgctttggagttgtgagggcgcaagatta gcagagagtcgggatgataacagtgtttatgacttatttgacctcgctcgggtaaacaag agacacaatggagtggctctggtcaaaggcgcagatccatacagccccgcatacagagtc ctgaacccagacctgatccccccagttcccgacagctccttcagggacctcatcgactcc atccaggctgagaggggtttcctcctcctggtcaacctgaagcagttcaagaaaaccagg ggcagcattttaaccatcgagaagactgacgggtccggacccattttcgagatcgtttcc aatggcaaagcgaacactttggacgtaatctactccaccatgaaccagcagcagctcgtg tccatcgaagatgcaaatttggccaccggacactggaagaacatcacgctgttcgttcaa gacgaccgtgcgcaactgtttgtgggctgtgaagagatcaatgtatcagagttggatgtg ccaatctatcaagtactgtcccaggaggtgacaaacatcgccaaagtcaggattggaaag ggagctgtgaaagacagatttatgggggtgcttcagaatgtgcgctttgtctttgggacc actctggacaccgtactgagaaataaggggtgcaacagtggagctaccttaactgatgtc atgaccctggacaacccagtcaacggctccagccctgccattaggactgattacaccggc cacaaagccaaagatctgcagtctgtctgtggcttctcttgtgaggacatcgcaggcatg tttaaggagctgaagggactcggcgtggttgttaaacagttgtcgaatgagctccgcaaa gtgtctgaggacagcacaatgctgaaaaatcaaatgaatatccacagtggaatctgcttc cacaatggcattgtgcacatggacaaagatgaatggactgtggatggctgcactgagtgc acctgtcagaactctgctaccatatgccgaaaaatctcctgccctctgatcccctgtgct aatgccactgtgcctgatggagagtgctgccctcgctgtggaccaccaagtgacgaagca gaggatggttggtccccctggtctgaatggaccccttgttcagtgacttgtggccggggc atccagcagcgtggacgctcctgtgaccgcatcaacagcaactgtgagggcacctctgtc cagacccgtgactgctacccccaggaatgcgacaaacgcttcaaacaggatggtggctgg agccattggtctccctggtcttcatgctctgtgacctgcggtgaaggcgtcatcacccga atccgcctctgtaattcccccacaccccagatgggtggcagagactgccagggagaagga cgtcaaaccgaaatctgccaaaagtctccttgtcctatcaatggaggttggggaccttgg tcaccatgggacacctgcactgttacctgtggtggaggagtccagaaccgcaaacgtctc tgttctgatcctgtccccaaatatggaggaaaggattgtgttggtgatgccacggtgtct caagtatgcaacaagcaagactgccctattgatggttgtctctccaacccatgcttccct ggcgcaaagtgctccagctcccccgatggctctttcagatgtggcagatgtccaccaggc tacaccgggaatggcgtcacctgcaaagacattgatgagtgtaaagaagttcctgatgct tgccacacacacaacggagttcatcgctgtgagaacactgagccaggttacaactgcttg ccctgcccgtcacgtttctccggtcctcagccctttggaagaggagtggagcaggcgact gccaaaaaacaggtttgcacaccccgtaacccttgccaggatggtagccacaactgcaat aaaaatgcaaactgtgtctacttgggcatctactccgaatccatgttccgatgtgagtgc aagccagggtatgctgggaatggccatatttgcggagaagacactgacctggatggatgg cccaatactgacctgctgtgtgtggagaatgctacctaccactgcaaaaaggataactgt cccaaccttcccaactctggccaggaagatcatgacaaagatggtctgggtgatgaatgt gaccatgatgatgacaatgatgggatccccgatgatagggacaactgtgaaaaagtgtac aaccctgcccagtatgacgctgacagggatgatgttggcgaccgctgtgacaactgtgtg ttcgaggctaacactgaccaaaccgacactgataataatggagagggtgatgcctgtgct gttgacattgatggtgatggcattctgaacgaaaacgacaattgcccatatgtttacaac gtggatcagagagatactgacagagatggagtgggagaccattgtgacaactgccctctg gaacacaaccctgatcagattgactctgactcagatcgcataggagacaagtgcgacaac aaccaggacattgacgaggatggtcaccagaacaacttggacaactgcccctacatcgcc aactccaaccaggcagaccacgacaaggatggcaagggtgacgcctgcgaccacgacgat gacaatgatggcattcctgatgacaaagacaactgccgactggcctttaaccctgatcaa ctggactctgatggtgatggtcgtggtgatatctgcaaagacgatttcgaccaagacaat gttctggacattgatgatgtgtgcccagagaactttgccatcagtgaaacagacttccgc agattccagatggttcctctggaccctaagggcacctcccagattgaccccaactgggtg gtccggcatcaaggcaaggagttggtgcagactgtcaactgcgaccctggcattgctgtt ggttttgacgagttcagcgcagtggatttcagtggaacattcttcatcaacaccgacaga gatgatgactatgctggctttgttttcggctaccagtccagctctcgcttctacacagtc atgtggaaacagatcacccagacctactggtcccacacacccacaagagctcaaggctac tctggcctgtctatcaaggtggttaactccaccactgggcctggtgagcacttgaggaat gccttgtggcacactggagataccgcaggacaggtgcgtactctttggcatgaccccaag aacattggctggaaggatttcactgcctacagatggcatctgacccacagacccaagact gggcttattagagtggtaatgtatgagggcaagagaataatggcagattctggaaacatc tatgacaagacctatgctggtgggcgactaggcttgtatgtcttctctcaggagatggtt tacttctcggacctcaaatacgaatgcagagatacataa

DBGET integrated database retrieval system