Scomber japonicus (chub mackerel): 128375575
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Entry
128375575 CDS
T09718
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04620
Toll-like receptor signaling pathway
sjo04621
NOD-like receptor signaling pathway
sjo04622
RIG-I-like receptor signaling pathway
sjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128375575 (traf3)
04621 NOD-like receptor signaling pathway
128375575 (traf3)
04622 RIG-I-like receptor signaling pathway
128375575 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128375575 (traf3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
NOCA1_mid
zf-C3HC4
CEP89
Sina_ZnF
CCDC39
ATG16
zf-C3HC4_2
CCDC113_CCDC96_CC
zf-TRAF_2
Fzo_mitofusin
zf-RING_4
KIF9
Rod_CreS
ODF2_C
FapA
CCDC192
FKBP15
Seadorna_VP6
Baculo_PEP_C
T4SS_LegC2C7
GAS
Astrin_C
HAUS1
DASH_Dad2
AAA_13
Snapin_Pallidin
NDC80_loop
Fez1
DUF1664
CENP-F_leu_zip
DUF724
KxDL
FlaC_arch
Exonuc_VII_L
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
128375575
NCBI-ProteinID:
XP_053191934
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All DBs
Position
16:154048..165497
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AA seq
595 aa
AA seq
DB search
MSAGRSADGREVQIPLQQVAPSLAPPLALAPPISPPPHRPANPWPPNDPALPPGVPAGFL
PLHGGFRDLFVEAPEAKYCCESCRLVLCQPRQTECGHRFCQSCITDILSRPNPVCPADME
PLFNNKIFRDVCCHREIMALKVYCRSQSNGCQEQMSLQQIPDHLNVCPFFEVPCPLGKCK
ERMMRKEIPDHLNRKCKHRETTCDFCMTKMPLTDLQKHKETVCPAFPVSCPNLCSFSSLP
RSELSTHQHDCPKAQVSCQFHRYGCTFKGLNQDMRQHDSTFAAEHLRMMANRNASLENKV
EDVKADLMDRYKVLPALSSRLSELENQNDELREKNRQMEQKLATMQKLMSSHSEKLLEVE
IELRSLRQLRDEVENLRGTLENVRTRLATLEQGGRSGTGSTTHTLASMETQLNRHDDMLS
MHEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAAKTLSLYSQPFYTGYFGYK
MCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPSRKHLGDAFK
PDPNSSSFRRPVAEMNIASGCPLFVSQSVLETGSYIKDDTIFIKVTVDTSDLPDP
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggggaggagtgctgacgggagggaggtgcagattccactccagcaggtggcg
ccctccctggccccgcccctcgccttggctcctcccatcagtccgccccctcacagacca
gccaatccctggcctcccaatgatcccgccctcccaccaggtgtccctgctggcttcctt
cctcttcatggaggcttcagagatctttttgtagaagctcctgaagctaaatactgctgt
gagtcctgcagactcgtcctctgccagccccgacagacggagtgtggacacaggttctgc
cagagctgcatcacagacatcctcagtcgtcctaacccggtgtgtcctgctgacatggaa
ccgctgttcaataacaagatcttcagagacgtttgctgtcatcgggaaatcatggcgctg
aaggtttactgtcgcagtcagagcaacggctgtcaggagcagatgagtctccagcagata
cctgatcacctgaacgtgtgcccgttcttcgaggttccgtgtccgttggggaaatgtaaa
gaacggatgatgaggaaggaaatccccgaccacctgaaccgcaaatgcaaacaccgagag
accacctgcgacttctgcatgaccaagatgcctctgaccgacctgcagaaacataaggag
acggtgtgtccggcgttcccggtgtcgtgtccaaacctctgctccttcagttcgctgccg
cggagcgagctctccactcaccaacacgactgtcccaaagctcaggtgagctgtcagttc
catcgctacggctgcaccttcaagggcttgaatcaggacatgaggcaacatgactccacc
tttgcagctgagcacctgagaatgatggccaatagaaacgcttccttagagaacaaggtg
gaggatgttaaagctgacctgatggacaggtataaggtgcttcctgctctcagcagtcgt
ctctctgaactcgagaaccagaacgatgagctgagagagaagaaccgccagatggagcag
aaactggccaccatgcagaaactgatgagctctcactcagagaagctcctggaggtggag
atcgagctgcgttctctccgtcagctcagagacgaggtggagaaccttcgaggaacacta
gagaacgtccggacaaggctggcgactctggaacaaggaggacgcagtggaactggatcc
acgacacacactctggcgtccatggagactcagctgaatcgccatgacgacatgctgagt
atgcacgagattcgattggctgacatggacctgcgtttccaggtgctggaaacagcgagc
tacaacgggacactgatctggaagattcgtgactataagagacggaaacaggaagcagtg
gcggcgaagacgctgtcgctgtactcacagccgttttacacgggatactttggatataag
atgtgcgctcgtgtctacctgaacggagacggcatgggcaagggaacgcacctgtcactg
ttcttcgtggtgatgaggggcgagtacgacgccctgttgccctggccctttaaacagaag
gtcactctgatgctgatggatcagggtccatccaggaaacacttaggtgatgcctttaaa
ccggatccaaacagcagcagtttcagacgtccggtagcagaaatgaacattgcctccggt
tgtcctctgtttgtgtctcagagtgtccttgagaccggcagctacatcaaggacgacacc
attttcatcaaggttaccgtggatacctctgaccttcctgacccttga
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