Scomber japonicus (chub mackerel): 128376674
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Entry
128376674 CDS
T09718
Symbol
dse
Name
(RefSeq) dermatan-sulfate epimerase
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
sjo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
128376674 (dse)
Enzymes [BR:
sjo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
128376674 (dse)
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GFIT
Motif
Pfam:
DUF4962
CobN-Mg_chel
Motif
Other DBs
NCBI-GeneID:
128376674
NCBI-ProteinID:
XP_053192428
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Position
17:25992570..26018834
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AA seq
956 aa
AA seq
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MRTHTRGAPTVFFISLLWPLLLAPAAAEVDPGGGIPFMGGNYNGHPMLYFGRGDVEELQF
AAAGSHQEMARRIRLAGETMLEHPEEYLPPWSPAEFSARWNEVYGNNLGVLSMFCLLYPH
RAGALDLAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYEYLNKGQQERFL
QVIGNASRLMYEKSYVRGWGFQYLHNHQPTNCVALLTGSLVYMTQGYLQEAYLWTKQVLS
IMEKSMILLQDVTDGSLYEGVAYGTYTTRSLFQYMFLVQRHFSISHFDHPWLLKHFAFLY
RTILPGFQRTVAIADSNYNWFYGPESQLVFLDRYVLRNGSGNWLAELIHQNRVTDGPGQA
GKGQRWCTLHTEFIWYDPGLSPKPPSDFGTSQLHHFEDWGVVTYGSALPANTNHSFLSFK
SGKLGGRAIFDIVHKNKYKEWIKGWRNFNAGHEHPDQNTFTFTPNGVPFITEALYGPKYT
LLNNAVLFSSVLSGSCFKPWAGQVTEACDSKWLTYKVGLAADAQGRVEAAMERQGMVFIR
GEGHSAYHPELKIRNFQRNLLLLHPQLLLLVDHIHLDADSPTRAMSAFFHNTDLPFQDTK
VDGVHGAFVSHGQDKYKMFWMDDTGYSSRGMLGYWNYPRGYPYNGSNYVNVTMPLRYPHT
RVAYIFFGPGVDVQSFSLRGDDQRVDIYLATKDHTYTIYLLTGEVTSKPLFAMVLLDHKK
IVFEKAAAVMESSPEEVEEYVNVMEDNLQHVKPVFQQMERHILGRVLNTASFRKTAERLL
QFSDKKNTEEVIEKMFAMSKKQGKGKAGKKVNLGEKLSESLPDIFAQIEVSEKKERQRTS
KRVYEDSPEEGDAESRAFMDYPDGRKNRKGGFVKGRKFKEVHMVATAGSEGLSSTASYIR
LFLLLNTATFFLLLAVLLTRFQRGRSLHTQRCFYTILLIDCFILLYLYSSCSHTQC
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagaacccacacccgcggggcccccacagtcttcttcataagtctgctgtggcccctg
ctgctcgccccggctgccgcggaggtggaccccggtggaggaatccccttcatgggaggc
aactacaatggtcatcccatgctgtacttcggaaggggggacgttgaggagctccagttc
gccgccgcagggagtcatcaggagatggcgaggcggatccggctggccggggagactatg
ctggagcacccggaggagtacctgcccccctggagccccgctgagttcagcgcccgttgg
aacgaggtgtacggaaacaacctgggtgtgctgtccatgttctgcctgctgtacccacac
agagccggggcgctggacctggccaaggactacatggagaggatggcggctcagcctagt
tggttggtgaaagacgccccttgggatgaggtgcccttggcgcactctttggtcgggttc
gccaccgcttacgacttcctgtacgagtacttgaacaagggccagcaggagcgtttcctc
caagtgatcggcaacgcctcccgtctcatgtacgagaagtcctacgtccgaggctggggg
ttccagtacctacacaaccaccagcccaccaactgcgtggctctgctcacaggaagcctg
gtttacatgacccaaggttatcttcaggaggcctacctgtggaccaagcaggtgctgtcc
atcatggagaagtccatgatccttcttcaggatgtgacggatggctccctgtatgaagga
gtggcctatgggacttacaccacccgctctctgttccagtacatgttcctggtgcagcgc
cacttctccatcagccacttcgaccacccctggctcctgaaacacttcgccttcctgtac
aggaccatacttcctggattccagcggactgtagccattgcagattccaactacaactgg
ttttacgggccggagagtcagctggtcttcttggaccgctatgtgttgcgtaatggcagt
ggaaactggctggcagagctgattcatcagaacagggtgacagacgggccagggcaggct
ggcaaaggccagcgatggtgtactctccacacggagttcatctggtatgatccaggcctg
tctcccaagcctccatcagattttggaacatctcaactccaccactttgaggactggggt
gtggtgacctacggcagcgctttacctgcaaacaccaaccactcctttctctccttcaag
tcagggaaactggggggacgtgccatttttgacattgttcacaagaacaagtacaaagag
tggatcaaggggtggaggaactttaacgctggccacgagcaccctgatcagaacactttc
acctttacgcccaatggtgttccattcatcactgaggcactatacggacccaagtacact
ttgctgaacaatgcagtgttgttcagctcggtcctctcagggagttgcttcaagccgtgg
gctggacaggtgacggaggcctgcgactccaagtggttgacttacaaagtggggcttgca
gctgatgcccagggcagagtcgaagctgccatggagagacagggaatggttttcatccgc
ggggagggacattccgcttatcatccagagctgaagatccgaaactttcaaaggaacctg
ctcctccttcacccacagcttctgctcctggtggaccacatccacctggatgctgacagc
ccaaccagggccatgagtgccttctttcacaacacagatctgccattccaggacacaaaa
gtagatggtgttcatggagcatttgtatcacacggtcaggacaagtataagatgttctgg
atggatgacacaggctacagtagcagagggatgttaggttactggaattaccctcgaggg
tacccgtataacggctccaactatgtgaacgtcacaatgccattgaggtaccctcacacc
cgggtggcctacattttctttggaccaggggtggatgtgcagagcttcagcctgcgtggt
gatgaccagcgggtggatatttacctggctaccaaggaccacacctacaccatctacctt
ctgaccggagaggtcaccagcaagcctctttttgccatggtgctgttggaccacaagaag
atcgtattcgagaaggcggcggctgtgatggagagctcaccagaggaagtagaggaatac
gtcaacgtgatggaggacaacctccagcatgtcaaacccgtcttccagcagatggagaga
cacatcctgggaagggttctcaacactgccagcttccgtaagactgcagagcgcctcctc
cagttctccgacaaaaagaatacggaggaggtcatcgagaagatgttcgccatgtccaag
aaacagggcaagggtaaggcggggaagaaagtgaacctcggggagaagctttctgagagt
ctacctgacatttttgcacagattgaggtgagtgaaaaaaaggagagacagaggacttca
aagcgtgtttatgaggacagcccagaggaaggagacgcagagtctcgggcctttatggat
tatccagacggccgcaaaaacagaaaggggggctttgtaaagggccgcaaatttaaggag
gttcacatggtggccactgcagggagcgagggtctgtccagcacagcctcttatataaga
ctgttccttctcctcaacactgccaccttctttttgttgctggctgtgttactgactcgc
tttcagaggggtcgaagcttgcacacgcagagatgtttctacaccatcctcctgattgac
tgcttcatcttactgtacctctactcctcctgctctcacacacagtgttaa
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