Scomber japonicus (chub mackerel): 128377168 Help Entry 128377168         CDS       T09718                                  Symbol cad Name (RefSeq) CAD protein   KO K11540   carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase [EC:6.3.5.5 2.1.3.2 3.5.2.3] Organism sjo  Scomber japonicus (chub mackerel) Pathway sjo00220   Arginine biosynthesis sjo00240   Pyrimidine metabolism sjo00250   Alanine, aspartate and glutamate metabolism sjo01100   Metabolic pathways sjo01240   Biosynthesis of cofactors Module sjo_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP Brite KEGG Orthology (KO) [BR:sjo00001]  09100 Metabolism   09104 Nucleotide metabolism    00240 Pyrimidine metabolism     128377168 (cad)   09105 Amino acid metabolism    00250 Alanine, aspartate and glutamate metabolism     128377168 (cad)    00220 Arginine biosynthesis     128377168 (cad)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:sjo01002]     128377168 (cad) Enzymes [BR:sjo01000]  2. Transferases   2.1  Transferring one-carbon groups    2.1.3  Carboxy- and carbamoyltransferases     2.1.3.2  aspartate carbamoyltransferase      128377168 (cad)  3. Hydrolases   3.5  Acting on carbon-nitrogen bonds, other than peptide bonds    3.5.2  In cyclic amides     3.5.2.3  dihydroorotase      128377168 (cad)  6. Ligases   6.3  Forming carbon-nitrogen bonds    6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor     6.3.5.5  carbamoyl-phosphate synthase (glutamine-hydrolysing)      128377168 (cad) Peptidases and inhibitors [BR:sjo01002]  Cysteine peptidases   Family C26: gamma-glutamyl hydrolase family    128377168 (cad)  Metallo peptidases   Family M38: beta-aspartyl dipeptidase family    128377168 (cad) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CPSase_L_D2 GATase CPSase_sm_chain OTCace_N OTCace CPSase_L_D3 MGS Dala_Dala_lig_C ATP-grasp ATPgrasp_Ter Amidohydro_1 ATP-grasp_3 Peptidase_C26 GARS_A GSH-S_ATP Motif Other DBs NCBI-GeneID:  128377168 NCBI-ProteinID:  XP_053193053 LinkDB All DBs Position 17:4296911..4345885 Genome browser AA seq 2236 aa AA seqDB search MAKMATLVLEDGTTFKGRLFGADVSVSGEVVFQTGMVGYPEALTDPSYRCQLLTLTYPLI GNYGIPKDEEGEFGLSKWFESSKIHAAALIIGELSENPSHWSSVKPLDHWLKEQGVPGLQ GIDTRRLTKKIREKGTMLGKLVMDGTPEDSVPFFNPDQRNLVQEVSMKEPKVFNPNGSLR ITVMDCGIKYNQIRCLAERGARVTVVPWDHPLDSTDFDGLFISNGPGDPQLCQATINNVR KVVCVDRPKPVFGICLGHQLLSLVIGAKTYKMKYGNRGHNQPCIHKGTDRCFITSQNHGF AVDPDTLPSDWDVLFTNANDHTNEGIVHNTQPLFSVQFHPEHMAGPTDLVSLFDVFLDTV RDHKEGKATKSVKQHLTEHLTFPRSSKPEDVPRPRKVLILGSGGLSIGQAGEFDYSGSQA IKALKEENIQTVLINPNIATVQTSKGLADKVYFLPLTSEYVTQVIKNERPDGVLLTFGGQ TALNCGVELTKLGVLEKYNVKVLGTPVASIEMTEDRKIFVEKMEEIDEHVAPSEAALSVE QAVAAAERLGYPVLVRSAFALGGLGSGFANNREEMTSLVTSAFAHTSQVLVDKSLKGWKE IEYEVVRDAYDNCITVCNMENIDPLGIHTGESIVVAPSQTLNDHEYNMLRNTAIKVIRHL GIVGECNIQYALNPESEQYYIIEVNARLSRSSALASKATGYPLAYVAAKLGLGIPLPQLK NSVTNQTTANFEPSLDYCVVKVPRWDLSKFLRVSTKIGSSMKSVGEVMAIGRSFEEAFQK ALRMVDENCVGFDHTIKPVSEKELQTPTDKRIFVLASALRAGYTVDQLYDLTKIDRWFLH KMKNIADHEKLLETYNQDESAMPPEVMRKAKQLGFSDKQIAQAVQSTELAVRKLRRDWSI LPVVKQIDTVAAEWPACTNYLYLTYHGTENDLGFGDQHVMVIGSGVYRIGSSVEFDWCAV GCITQLRKMGYKTIMVNYNPETVSTDYDMCDRLYFDEISFEVVMDIYEMENPEGIILSMG GQLPNNIAMSLHRQQCRILGTSPEFIDCAENRFKFSRMLDTIGISQPQWKELSDTESAAK FCETVGYPCLVRPSYVLSGAAMNVAYTDSDLEKYLSSAVAVSKEHPVVISKFIQEAKEID VDAVACDGVVMAIAVSEHVENAGVHSGDATLVTPPQDLNQKTIERIKMIVHAIGQELQVT GPFNLQLIAKDDQLKVIECNVRVSRSFPFISKTLGVDLVALATQIIMGEDVEPVGLMRGK GIVGVKVPQFSFSRLAGADVVLGVEMTSTGEVACFGENRYEAYLKAMLSTGFKIPKKNIL LSIGSYKNKSELLPTVQALESLGYDLYASLGTADFYTEHGVKVTAVDWPFEEEESECPTK EKQRSIMNYLEENHFDLVINLSMRNSGGRRLSSFVTKGYRTRRMAIDYSVPLIIDIKCTK LFVQALHQIGRSPPVKTHIDSMASQTLVRLPGLIDVHVHLREPGATHKEDFSSGTAAALA GGVTMVCAMPNTSPAITDPNTLALVQKLAKAGCRCDYALYVGAASDNAAVLPSIAGQAAG LKMYLNDTYSDLKMDNVSLWMEHFEKWPKLMPIVAHAEKQTVAAILMVAQLYQRPVHICH VAKKEEILIIRASKQKGIQVTCEVAPHHLFLCEEDVPDIGDGRAQVRPMLGTREDMEALW ENLDIIDCFATDHAPHSLEEKSGERPPPGYPGLETMLPLLLTAVSDGRLTLDDIIRRLYD NPRRIFNLPVQENTYVEVDLEQEWVIPQAMQFTKSKWTPFQGMKVKGKVRRVVLRGEVAY IDGQVLVPPGYGEDVKTWPAASILPAEPVKECPKTPEHPPRPTPPREGPVRVRAPSPRRS GAGDGRYLLPPRTHRSSDPGLPPEMVMLPPSGVVEGYAHPPPLSRLMSPQSIPGQIPAGQ MSHFQTSPLLHLLVGQHILSVSQFSKEQISHLFNVAHTLRLMVQKERSLDILKGKVMASM FYEVSTRTSSSFSAAMQRLGGSVVHFSESTSSSQKGESLADSVQTMSCYADVLVLRHPTP GAVESASRHCRKPVINAGDGVGEHPTQALLDVFTIREELGTVNGMTITMVGDLKHGRTVH SLAKLLTQYRITLRYVAPKNLHMPTEIISYVASKGIKQEEFENIEEALPETDVLYMTRIQ KERFASEEEYKACFGQFILTPHIMTVAKKKMVVMHPLPRVNEISAEVDTDPRAAYFRQAE NGMYIRMALLATVLGR NT seq 6711 nt NT seq  +upstreamnt  +downstreamnt atggcaaagatggcaaccttggttttggaggacgggacgacgtttaaaggccgccttttt ggtgcagatgtgtccgtgtcaggagaagttgtgttccagacaggcatggtcggttacccc gaagctctcactgacccatcgtaccgctgccagctgctgacactcacataccctctgatt ggtaactatggtatcccgaaggacgaggagggagagtttggactgagcaagtggtttgag tcgtcaaagatccacgctgcagctctgatcatcggagagctgtcggagaatccaagtcac tggagttcagtcaagccgctggaccactggctcaaagagcaaggagttcctggattacaa ggcatcgacactcgccgcctgaccaagaagatcagagagaaaggcaccatgctggggaag ctggtgatggacgggactccggaggacagcgtccccttcttcaacccagaccagaggaac ctggtccaagaggtctccatgaaggaacccaaagtgttcaatcccaacggtagtctacgg atcacagtgatggactgcggtatcaaatacaatcagatccgctgtctggctgagagaggg gctcgtgttaccgtggtaccctgggaccacccgttggacagcacagattttgacggtttg ttcatcagtaacggccccggtgaccctcagctctgccaggcaaccatcaacaacgtgagg aaggtggtctgcgtggatcggccaaagccggtcttcggcatctgtctcggacaccagctg ctgtctttagtcatcggagccaagacctacaagatgaagtacggtaaccgtggtcacaac cagccatgcatccataaaggaacagaccgctgcttcatcaccagtcagaatcacgggttt gccgtcgaccccgacacgttgcctagcgactgggacgtcctgttcaccaacgccaacgac cataccaacgagggcatcgtacacaacacacaacctctgttcagcgttcagttccacccg gagcacatggccggtcccactgatctggtcagtctgttcgacgtcttcctcgacaccgtc agagaccacaaagagggcaaagctaccaaatctgtgaagcagcatctgacggagcatctg accttccctcgttcctcgaagcctgaagatgttcctcgacccagaaaggttctgatcctg ggctctggaggactctccatcgggcaggctggcgagttcgactactccggctctcaggct attaaagctctgaaggaagagaacatccagacggtgctgatcaacccaaacatcgccaca gtccagacctccaaagggctggccgacaaagtctacttcctgccgctcacgtcggagtat gtcactcaggtgataaagaacgagcgtccggacggcgtcctcctgaccttcggggggcag acggctctgaactgcggcgtggagctgaccaagctgggcgtcctggagaagtacaacgtg aaggtgctgggaacgccggtggcctccatcgagatgaccgaggaccgcaagatcttcgtg gagaagatggaagagatcgatgaacatgtggcgcccagtgaagcggcgctgtctgtggag caggcggtggcagcagcagagcggcttggctaccccgtcctggtccgttcagcgttcgct ctgggcggtttgggctccggcttcgccaacaaccgggaggagatgacctctctggtgacg tcggcgttcgcccacacctcccaggtgctggtggacaaatctctgaaaggctggaaggag atcgagtacgaagtggtccgagacgcctacgacaactgtatcactgtgtgtaatatggag aatattgaccctctgggcatccatactggcgagtctatcgtggttgctcccagccagacg ctcaacgaccacgagtacaacatgctgaggaacacggccatcaaagtcatccggcacctc ggcatcgtgggagagtgtaacatccagtacgccctcaaccccgaatctgagcagtattac atcatcgaggtgaacgcacgtctgtcccggagctcggctctggccagtaaggcgactggt tatccgctggcttacgtagcggctaaactgggactggggatcccgctgccacaactcaag aactctgtcaccaaccagaccacggctaactttgagcccagtctggattactgtgtggtg aaggtgcctcgctgggatctgagcaaattcctccgagtttccaccaagattggcagctcc atgaagagtgtcggcgaggtgatggccatcggtcgtagctttgaggaagctttccagaaa gctctgaggatggtggatgagaactgtgtaggattcgatcacaccatcaaacctgtgtct gaaaaggagctgcagacgccgacagataagcgtatcttcgttctggcctcggcgctgaga gccggctacacggtggaccagctctacgatctcaccaagatcgaccgctggttcctccac aagatgaagaacatcgccgaccacgagaagctgctggagacttacaaccaggatgagagc gccatgcctccagaggtgatgcgtaaagccaaacagctcggcttctccgacaagcagatc gctcaggctgtgcagagcacggagctggcggtgagaaagctgcgtcgtgattggtccatc ctgccggtggtgaagcagatcgacacggtggcggccgagtggcccgcctgcaccaactac ctgtacctgacctatcacggcacggagaacgacctgggcttcggagaccagcacgtcatg gtcatcggctcgggcgtctaccgcatcggcagcagcgtggagtttgattggtgcgccgtg ggatgcatcacgcagctcaggaagatgggttataagaccatcatggtgaactacaaccct gaaaccgtcagcacagactacgacatgtgtgaccgcctctacttcgatgagatctccttc gaggtggtgatggacatttacgagatggagaaccctgaaggcatcatcctgtcgatgggc ggccagcttcccaacaacatcgccatgtctctgcaccggcagcagtgtcgcatcctggga acgtcgcccgagttcatcgactgcgccgagaacaggttcaagttctccaggatgctcgac accatcggcatcagccagccgcagtggaaggagctctccgacaccgagtctgctgctaag ttctgtgagacggtgggctacccctgcctggtgagaccctcctacgtgctgagcggagcg gccatgaacgtagcgtacaccgacagcgacctggagaaatacctgagcagcgccgtcgcc gtatccaaggagcatccggtcgtcatctccaaattcatccaggaggccaaggaaatagac gtggacgccgtagcgtgtgacggggtcgtcatggcgatcgccgtgtccgaacacgtggag aacgccggcgtccactccggcgacgccacgttggtgacgccgcctcaggatctcaatcag aagacgatcgagaggatcaagatgatcgttcacgccatcggacaggagctgcaggtcacc ggaccgtttaacctgcagctcatcgccaaggacgaccagctgaaggtgatcgaatgcaac gtccgagtctcccgctccttccctttcatatccaagacgctcggcgtggacctggtcgcc ctggcaacgcagatcatcatgggcgaggacgtcgagcctgtgggcctgatgagaggaaaa gggattgtgggcgtcaaggttcctcagttctcgttctctcggctggccggagcggacgtg gttctcggggtggagatgaccagcaccggagaagtcgcctgttttggggagaaccgatac gaggcgtacctcaaagccatgctgtccacaggcttcaagatccccaagaagaacatcctg ctgtccatcggcagctataagaacaagagtgagctgctgccgactgttcaggctctggag tctctgggttacgacctttacgccagtctgggaacggccgacttctacacagagcacgga gtcaaggtgacggcagtggattggccgttcgaggaggaagagagcgagtgtcccaccaag gagaagcagcgcagcatcatgaactacctggaggaaaaccacttcgacctggtcatcaac ctctccatgaggaacagcggcggccggcggctgtcctccttcgttaccaagggttaccgg accagacgcatggccatcgactactccgtgccgctcatcatcgacatcaagtgcaccaaa ctctttgttcaggctcttcaccagattggccgaagtccaccagtgaaaactcacattgac agcatggcctctcagacgctggtccgtctccccggtctgatcgacgtccatgtccacctg cgggagcccggtgccacgcacaaggaggacttctcgtcaggtacggcggctgctctggca ggaggcgtgaccatggtgtgtgccatgcccaacacttcccccgccatcaccgaccccaac acgctggctctggtgcagaagttggctaaagcgggctgccgctgtgactacgctctgtac gtcggagctgcttcagataacgccgccgtgctgccgtccatcgccggtcaggcagcaggt ctgaagatgtatctgaacgacacgtactccgacctcaagatggacaacgtctctctgtgg atggagcactttgagaagtggcccaagctgatgcccatcgttgctcacgctgagaagcag acggtcgccgccatcctgatggtggctcagctctaccagcggccagtccacatctgccac gtcgccaagaaggaggagatcctgatcatccgagcttccaagcagaagggcatccaggtc acatgtgaggtcgctcctcatcacctcttcctgtgtgaggaagacgtgcccgacatcgga gacggacgagcacaagtccggcccatgctgggaacacgcgaggacatggaggcgctctgg gaaaacctggacatcatcgactgcttcgccacagaccacgctcctcactctctggaggag aagagcggcgagcgtcctcctcctggttaccccggcctggaaaccatgctgccgctgctg ctcaccgccgtcagcgatggacgtctgactctggatgacatcatcagacgtctgtacgat aacccacgcaggatcttcaacctgccggtccaggagaacacctacgtggaggtggacttg gaacaggagtgggtcattcctcaggccatgcagttcaccaaatccaagtggacgcctttc caagggatgaaggtgaagggtaaagtccgccgagtggttctgcgaggagaggtggcgtac atcgacggacaggttttggtgcctccaggttacggtgaagatgtgaagacttggccggct gcttccatccttcctgctgaacctgttaaagaatgtccaaagaccccggagcatcctcct cgtccgactcctccccgtgaaggtccggtacgagtccgagcacccagccctcggcgctca ggagcgggagacggccgctacctgctgcccccccgcacccaccgctcctctgaccctgga ctaccaccagagatggtcatgctcccacccagcggtgtcgtcgagggttacgctcaccct cctccgctgtccaggctgatgtctcctcagtccatcccaggacagatacctgctggacag atgtctcacttccagacgtctcctctgttgcacctgctggtgggacaacacatcctgtcc gtcagccagttcagcaaagagcagatctctcatcttttcaacgttgctcacacgttgcgt ctgatggtgcagaaagagcgaagcctggacatcctgaagggtaaggtgatggcgtccatg ttctacgaggtcagcacccgcaccagcagctcgttctcggcggcgatgcagcgtctgggc ggctccgtcgtccacttcagcgagtccacgtcgtccagtcagaagggagaatcgctggcc gactcggtccagaccatgagttgctatgccgacgtcctggtgctgcgacacccgacgccc ggagccgtggagagtgcgtctcgtcattgtcgtaaaccggtgatcaacgctggcgacggc gtgggcgagcatcccacccaggcgctgctggacgtcttcaccatccgagaggagctgggg acggtcaacggcatgacgataacgatggtcggagatctgaaacacggccgcaccgttcac tccctcgccaaactgctgactcagtaccgcatcactctgcgctacgtggcccccaagaac ctgcacatgcccacagagatcatcagctacgtcgcctccaagggcatcaaacaggaggag tttgagaatatcgaggaagctctgccagagaccgacgtcctctacatgacgaggatccag aaggagagattcgcctctgaggaagagtacaaagcctgtttcggacagttcatcctcact cctcacatcatgactgtggccaagaagaagatggtggtcatgcatccgctgcccagagtc aacgagatcagtgcggaggtcgatacggaccctagagctgcatatttccgtcaggcagag aacggcatgtacatccgaatggccctgctggccaccgtactgggaagatag

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