Scomber japonicus (chub mackerel): 128378525
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Entry
128378525 CDS
T09718
Symbol
trpm4a
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4a
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128378525 (trpm4a)
Ion channels [BR:
sjo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128378525 (trpm4a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
128378525
NCBI-ProteinID:
XP_053194060
LinkDB
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Position
18:652918..697521
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AA seq
1257 aa
AA seq
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MKGLEKERDGGGGKAGSQKEKDQSWIPKIINKRVCTTFVEDSLSNGALCQCGGVREVHDS
VATGDYFGAAIVSQWDSKQHSSECPTDAFGELEFAGAGRRHSHFLRLSCDTSPQIIYTLM
TTHWGLPSPNLVVSVVGGEGHEKIKTWVRDVLRNGLVKAAQSTGAWILTGGLREGVARCV
GEAVRDHGAAAPALSQKKVIAVGLAPWGLVHNRQRLVSAQGSFPARYYIQNTSYDSCSLD
NNCQAFLLVDDGSVGRRGGETAFRANLEDYISHQRTGIWGSGSIEIPVLCMLISGDANML
ERLDASLRKSTPWLVLAGTGPAADLISELLRHLSPVVMSPTSPSVEGEAAEGLSTELRDR
VRDQIRKHFPAEADVEKLVDSALSIYQNRELITVFHEEQEGLDDFDTVLLKTLVRASKRV
SSEASEYTEELKLAVAWNRVDIAKTELFNGDIQWKYNDLEDSMTDALINDKPQFVRLFCE
NGLNILDYLTYGRLESLYRSLSDSSLAYILLQRRLTERQGLAGSMPNMDGAMTTPLKSPQ
SPLTGPVSAKELSLYEVSRLVSDLLGDVCHPFYYVPLGLDQSSGTRRSIKQVNKMLLGEC
VYRDKRCPSPWAALYIWAVLQNRREMAVFFWAMAGESVLSALGGCKMLRELSKLESETEN
KVAMKLLAQKLENLAHDVFGECYQSSESRSFTLLIRKSPVWGDATCLQMATAADARLFFS
HDGVQSLLSQIWWGDMEQSTDVWKLVLTFFIPPLLYTDLISFREQEEEVKSQTVHQGRDT
DSLDGNDGTVFSLADIIQNEEEAEEFQALKENLKVKVPSNSKRPFFLTRWRQFWFAPVTS
FLGNVLMYFLFLCLFAYVLLVDFKPPPPNGPATLEFVLYFWVFTLVCEEIRQTFFMGGSS
VLQRMKNYIQDVWNKCDLTAITLFTLALCCRMFPWSYEFGRAVMAIDFMVFTLRLIHIFA
IHKQLGPKIIIVGKMMKDVFFFLFFLAVWLMAYGVANQALLYAYDPRPDWIFRRVFYRPY
LHIFGQIPINEMDADKLIDIKCTNNTTRIEAGEEPCMSTYANWLVVILLVIYLLVTNILL
VNLLIAMFSYTFSKVQERSDTYWKFQRYNLIVEYHSRPCLAPPFIIISHLHLLIKRYIRH
IPSAKSRHFVGELRGRKASRLNTWESIQKENLLSAQNKRKRESDTARLKSTSVKVDSVLK
QMTEIRDHDRRLRLLETQLEYCCSTLSWMADALSQSNVIKASRPAPLLRDLAPLSPR
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtctggagaaagaaagagacggaggaggtggaaaagctggaagtcagaaagag
aaagatcagagctggatccccaagatcatcaataagagagtgtgcaccacttttgttgaa
gactctttaagtaatggagcattgtgtcagtgtgggggggtgcgggaggtgcatgactct
gtggccacaggggattactttggagcagctattgtcagccaatgggacagcaagcagcac
tcttcagagtgtcccaccgatgccttcggagagctggagtttgctggagcaggacgcaga
cacagccatttcctgcggctatcatgtgacacatcgcctcagatcatctacaccctgatg
accactcactggggtctgccctcacccaacttggtggtgtcagtggttgggggtgaagga
catgagaagattaaaacatgggtgagagatgttctgagaaacgggctggttaaggctgca
cagagcacaggggcctggatcttgacagggggtcttagagagggtgtggcccgctgcgtg
ggtgaggcggtgagagaccacggggctgcagctccagctctctcccagaaaaaagtgatc
gcagttggactggcaccctggggcctagtgcacaacaggcagcggcttgtcagtgcacag
gggagcttccctgctcgttactacatccagaacacatcatatgactcctgctccctggac
aacaactgccaggctttcctcttggtggatgatgggagtgttgggcgccgaggaggagag
acagcgtttcgtgctaatctggaggactacatttcccatcagcgcactggcatttggggt
agtggcagtattgaaatcccagtgctgtgcatgctcatctcaggagacgccaatatgctc
gagagattagatgcctctctgaggaaatctacgccctggctggttcttgctggtactggt
ccagctgcagaccttatcagtgagctgctgagacatctctcccctgttgtcatgagtccc
acctctccttcagtagagggggaggcagctgagggtctcagcacagagctccgcgacagg
gtccgcgaccagatccgtaaacacttccctgctgaagccgacgtggagaaactagtggac
agcgctctgagtatttatcagaacagagagctcatcactgttttccacgaggagcaggag
ggtcttgatgattttgatacagttctcctcaaaacccttgttagagctagtaaacgtgtg
tctagtgaggccagtgagtacactgaagagctgaaactggccgtggcctggaaccgagtg
gacattgccaaaactgagctcttcaatggagacatacagtggaagtataatgacctggaa
gactccatgacggatgctctgatcaatgacaagcctcagtttgtgcgtctcttctgtgag
aacggtctgaatatcttggactacctgacttacgggcgtttggaaagcttgtaccgctcg
ctgtctgacagctcactggcctacattctgcttcagcgtcgcctgactgagaggcagggc
ctggcaggatccatgcctaacatggatggagctatgacaacacctctaaagagtccccag
agtccactgactggacctgtctcagcaaaggagctgagcctctatgaggtatcccgcctg
gtgtcagacttgttgggtgatgtctgtcatcctttctattatgtgcctctgggactggac
caaagctctggcaccaggaggtccatcaagcaagtcaacaagatgttgctgggggagtgt
gtgtatcgggacaagcgctgcccgtctccatgggcagctctgtatatctgggctgtcctg
cagaaccgccgagaaatggctgttttcttctgggcgatggcaggggagtcagtgctgagt
gctctgggtggctgtaagatgctgagggagctttctaagcttgagagtgagactgagaac
aaagtcgccatgaagttactggcacagaagttagagaacctggcacacgatgtatttggt
gagtgttatcagagcagtgagagtcgctccttcactctccttataaggaagtctccagtg
tggggcgatgctacctgcctgcagatggccactgcagctgacgctcgcctgttcttcagc
catgatggtgttcagtctctgctgtctcagatctggtggggagacatggaacagagcaca
gatgtctggaaactggttcttaccttcttcataccccccctcctctacacagaccttatc
agcttcagggaacaggaggaggaggttaagtctcagacggtccaccaaggcagagacact
gacagtctggatgggaatgatggaaccgtcttctcccttgctgacattatacaaaatgag
gaagaggctgaagagttccaggctctgaaagaaaacctgaaagttaaagtgccatccaat
tccaagagaccattctttctgacacggtggagacagttctggtttgcccccgtcacctca
ttcttaggcaacgtgttgatgtacttcctgttcctctgcctgtttgcctatgttctgctg
gtggatttcaagcccccgccccctaacggccctgctactctggagtttgtgctctacttc
tgggttttcaccttagtatgtgaagagattcgacagaccttctttatgggaggttcctct
gtgctccagcgaatgaagaactacatccaggatgtgtggaacaagtgtgacctcacagcc
atcacactctttactttggctctgtgctgcagaatgtttccctggtcatatgagtttggc
cgagctgtgatggctatagattttatggtcttcacactacgtctgattcatatatttgcc
atccacaaacagcttgggcccaagattatcattgttggcaaaatgatgaaggacgttttc
ttcttcctctttttcctggctgtttggctcatggcctatggagtagccaatcaggcactc
ctctacgcatatgatccccgtcctgattggatatttcgtcgtgtgttctacagaccgtac
ctgcacatttttggacaaatacccataaatgaaatggatgctgacaagttgatagacata
aagtgtacaaacaataccacacgcattgaagcaggagaggagccctgcatgagcacctac
gctaactggctggttgtcatcctcctggtcatctacctgctggttaccaacatactactg
gtcaacctgctcattgctatgttcagctacaccttctctaaagtgcaggagcgcagtgac
acctactggaagtttcaacgttacaacctgatagtggagtaccactcgaggccctgcctg
gccccacccttcatcatcatctcacacctccaccttttgatcaaacgatacatccggcac
atcccctcagccaagagcagacactttgttggagagctgcggggcagaaaagccagccgc
ctcaacacatgggagagtatccagaaagaaaacctcctctcagctcagaataagaggaag
agggagagtgacacagcacgacttaaatctacatctgtcaaggtggacagtgtgctgaag
cagatgaccgagatccgtgaccatgatcgaaggctgcggctgctagagacacagttggag
tactgctgcagtactctttcctggatggcggatgctctgtctcagagtaatgtgataaag
gccagccgtcccgctccactcctcagagatctggctccactgtctccaagatga
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