Scomber japonicus (chub mackerel): 128378975
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Entry
128378975 CDS
T09718
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b
KO
K04359
platelet-derived growth factor subunit A
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04020
Calcium signaling pathway
sjo04510
Focal adhesion
sjo04540
Gap junction
sjo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128378975 (pdgfab)
04020 Calcium signaling pathway
128378975 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128378975 (pdgfab)
04540 Gap junction
128378975 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128378975 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sjo04052
]
128378975 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
sjo00536
]
128378975 (pdgfab)
Cytokines and neuropeptides [BR:
sjo04052
]
Cytokines
Growth factors (RTK binding)
128378975 (pdgfab)
Glycosaminoglycan binding proteins [BR:
sjo00536
]
Heparan sulfate / Heparin
Growth factors/receptors
128378975 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
TraY
Motif
Other DBs
NCBI-GeneID:
128378975
NCBI-ProteinID:
XP_053194542
LinkDB
All DBs
Position
18:complement(16403863..16421598)
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AA seq
208 aa
AA seq
DB search
MRAALCYFLLWTTYLLLATSEEVEFPQELIDRLSHSEIHSISDLQRLLEIDSVGTGNDVI
EEPKHHKHHNHHKNYSRHPGYYNELKSSQLHSRRKRSLVEEAVPAVCKTRTVIYEIPRSQ
VDPTSANFLIWPPCVEVKRCTGCCNTSNMRCHPSRKHHRTVKVAKVEYVRRRPKLKEVFV
RLEDHLECVCTSQHHVVEHSDAETVDVR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcactttgttacttcctgctgtggacgacgtacctgctgctggccacctct
gaggaagtggagtttccccaggagctgatagacagactgtcccacagtgaaatccacagc
atcagcgacctccagcggctactagagattgactccgtaggtacgggaaacgatgttatt
gaggagcccaagcatcacaagcaccacaaccaccataagaactattcccgtcatcctggt
tactacaatgaactgaagagctcccagctccacagccgacgcaagaggagtctcgtggaa
gaggcggtcccagcagtgtgtaagacgcggacggtgatctacgagatccccaggagccag
gtggatcccacatctgctaacttcctgatatggccgccctgtgtggaggtgaagcgctgc
acgggctgctgcaacaccagtaacatgcgctgtcatccttcccgcaagcaccaccgcacc
gtgaaggtggccaaggtggagtacgtgagaaggagacccaagctgaaagaggtctttgtg
cggttagaagaccacctggagtgtgtgtgcacgtcacagcatcatgtggtggagcactca
gatgcagaaacagtggacgtgaggtga
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