Scomber japonicus (chub mackerel): 128379635
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Entry
128379635 CDS
T09718
Symbol
lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00514
Other types of O-glycan biosynthesis
sjo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
128379635 (lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128379635 (lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sjo01003
]
128379635 (lfng)
Enzymes [BR:
sjo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
128379635 (lfng)
Glycosyltransferases [BR:
sjo01003
]
Glycan extension
O-Glycan
128379635 (lfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
128379635
NCBI-ProteinID:
XP_053195303
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All DBs
Position
18:19990816..19998542
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AA seq
373 aa
AA seq
DB search
MLKNNGKKTAISVASTACLCLVLLLVAVQHHHRVQVHEETNREDSGTRSLLQEEEEGDAQ
PGSAQVKKGFSAYFTKLTRGRREVEKPVRSSASTADPPPAEDISADDIFIAVKTTKKFHQ
SRLNLLLDTWISRNMQQTYIFTDGEDEELKKKIGSHAINTNCSAAHSRQALSCKMAVEYD
KFIESGKKWFCHVDDDNYVNVRTLVKQLSQYPHTQDMYIGKPSLDRPIEATERLRDNKMK
AVNFWFATGGAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIESVLGVPLT
RSNLFHSHLENLQQVSRSEIHKQITLSYGMFENKSNIINLKGAFPVEEDPSRFKSVHCLL
YPDTPWCPPQVAF
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaaataatggaaagaagaccgctatctctgtagccagcacagcatgtctctgt
ctggtgctgctcctggtcgctgtgcagcatcatcaccgggttcaggtgcatgaggagacc
aaccgagaggactctgggacgcgctctcttctccaagaggaggaggagggcgacgcacag
cctgggagcgcgcaggttaagaaaggattctcggcgtacttcaccaagctgacccgagga
cggagagaagtggagaagcccgtacgctcatctgcgtccaccgctgacccgcctccagcc
gaggacatcagcgctgatgacatcttcatcgctgtgaagaccaccaagaagttccaccag
tccagactgaatctgctccttgacacctggatctcaagaaacatgcaacagacctacatc
ttcaccgacggagaagacgaggagctaaaaaagaaaatcgggagtcatgcaatcaacacc
aactgctctgcagctcatagccgacaggctctgtcttgcaagatggcggtggaatacgac
aagttcatagagtctgggaaaaaatggttttgtcacgtcgatgatgacaactatgtgaat
gtccggactcttgtgaagcagctctcccagtatccccacacacaggacatgtatattggt
aaacccagtctggaccggcccatagaggccacagagaggctccgggacaataaaatgaaa
gcggtcaacttctggtttgctactggaggagctggcttctgtgtgagccggggtctggca
ctgaagatgagcccgtgggccagtggcggccacttcatgaacacagcagagaagatccgt
ctgcctgacgactgcaccatcggctacatcatcgagtcggttctgggggttcctctgacc
cgcagcaacctgtttcactcccacctggagaacctgcaacaagtgtcaagatctgagatt
cacaagcagatcaccctcagttatgggatgttcgaaaacaagagcaatatcatcaatttg
aaaggagcttttccagtggaggaggatccatcaaggttcaagtctgtgcactgtctcctg
tatccagacactccatggtgtcctccccaggttgccttttag
DBGET
integrated database retrieval system
