KEGG   Scomber japonicus (chub mackerel): 128379964
Entry
128379964         CDS       T09718                                 
Name
(RefSeq) toll-like receptor 2
  KO
K10159  toll-like receptor 2
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04145  Phagosome
sjo04620  Toll-like receptor signaling pathway
sjo05132  Salmonella infection
sjo05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128379964
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    128379964
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    128379964
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128379964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sjo04131]
    128379964
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sjo04147]
    128379964
   04054 Pattern recognition receptors [BR:sjo04054]
    128379964
   04090 CD molecules [BR:sjo04090]
    128379964
   00536 Glycosaminoglycan binding proteins [BR:sjo00536]
    128379964
Membrane trafficking [BR:sjo04131]
 Endocytosis
  Phagocytosis
   Toll-like receptors
    128379964
Exosome [BR:sjo04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   128379964
Pattern recognition receptors [BR:sjo04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   128379964
CD molecules [BR:sjo04090]
 Proteins
  128379964
Glycosaminoglycan binding proteins [BR:sjo00536]
 Hyaluronan
  Cell surface receptors
   128379964
SSDB
Motif
Pfam: LRR_8 TIR LRR_4 TIR_2 LRR_5 LRR_1 LRR_9
Other DBs
NCBI-GeneID: 128379964
NCBI-ProteinID: XP_053195579
LinkDB
Position
2:complement(13603401..13607443)
AA seq 790 aa
MRTVVFLMFVLLSMTDSVSRPQCHSCERTSCKCSRQNLTKVPAVPSHVTTELDLSFNRLG
KITSDDFIAYTSLRCLIISNNRIRVIEEPAFDPLTNLEKLDLSSNRLDSLSVGWFKNLVS
LQYLNLVGNMYKTLGQGNLFQSLKKLKFLHIGGPHLQSVRKSDFSGLSKLEELFFDGEKL
QVYAEGSLRQIGHISHVTLGLNGPFMTNPALVKVILTDVAHPNTTLTFTDTKFYKEDQMS
PIHVVSDSGTKSLILKNSTMSITASVTLLKMLSQSDITMLAIEDTKIEYIIFGPPTFLPK
VDHLEVIIFKNIDIPQYYNFPVLPLLKPLLERVQRLSLINSKLFAIPCLLSVNVVDLEFF
DITDNMITDLVLREMLCDGKFDHFNLQTINISRNNLHSINSQLFTKLHNLKNIDMSGNMF
YTMPETCNWPPNLQYLNLSSMHLGIVTSCLPTSLRIIDLSYNDLKAFNIELPLLTDLYIS
GNKMYSFPDGDLYPRLSFLSIQNNYLNAFSKNDIEKYKMLKNLEAGMNMYDCSCDFLAFM
TSDMKNYRVTFGDELKSYICHSPDAARGKTIADARLSVFECHTALALSLLCLGILAVFLL
FAGLCHRFNVMWYMKMTWAWLKAKKKPKLKKEELEYDAFVSYSEMDSGWVEAHLIPELEQ
SEPPVRLCLHKRDFVPGGWILDNIMNAIEKSHKTLFIISKHFVRSEWCKYELDYTHFRLF
DRNIDTAVLILLEPIDKETIPKKFCKLRRVMNSRTYLEWPDEDNQIPRFWQSLRAAIRRP
VDIIRFNVDE
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgagaactgtggtatttctgatgttcgtcctcctgtcgatgactgacagcgtctccaga
ccacagtgtcacagctgtgaacgaacatcatgtaaatgctcaagacaaaacctgactaaa
gtccccgcagtcccctcgcacgtcaccactgagcttgacctctcgttcaacagactgggg
aaaataacgagcgacgactttattgcatacaccagtttaaggtgtttgatcataagtaac
aacagaatccgagtgatcgaggagccagcatttgacccgctgaccaatttggagaaactg
gacctatcctcaaatagactggattccttgtctgttggatggtttaagaacctagtatcc
cttcagtacttgaatcttgtggggaacatgtataaaactctggggcaaggcaatctcttc
cagtcgctgaagaaattaaagttcctacatatcggtggacctcaccttcagtctgtcaga
aaaagtgacttttctgggctcagcaaacttgaagaattattttttgatggggaaaaactg
caggtctatgcagaaggaagtttgagacaaattgggcatatcagccatgtgacacttggt
ctgaatggtccatttatgacaaatcctgcacttgtaaaagtcatactgactgatgttgca
cacccgaacacaacactgactttcactgacacaaagttctacaaagaggatcaaatgtcc
ccaattcatgtggtcagtgacagtggtactaaaagtcttattttgaaaaattcaaccatg
tcaattacggctagtgtgacacttttgaaaatgctgtcacaatctgatataactatgctg
gcaattgaagatacaaaaatagaatatattattttcggtccccctacgtttctcccaaag
gttgaccatttggaggttattatctttaaaaacattgacatccctcaatactacaacttc
ccagtcctccctctcctgaaacctctcttggaaagagtgcaaaggcttagtttgataaac
tccaagttgttcgctattccttgtttgctctctgttaatgtcgttgacctggagtttttc
gacattactgacaatatgatcactgatctggtcctgagagaaatgttgtgcgatggcaaa
tttgatcattttaatctgcaaaccattaatatcagcaggaataacctgcactcaataaac
agccagctcttcaccaaactacataaccttaaaaacatcgacatgagtggaaatatgttt
tatacaatgcctgagacttgtaactggccaccaaatctccaatatttaaacctttcatca
atgcatttaggaattgtgacctcttgtctaccgacgagtttacggattattgatctatcg
tacaatgacttgaaggcgttcaacatcgaactacctcttctcacagatttatacatctct
ggaaacaaaatgtatagtttcccagatggtgatttatatcctcgtctgtcatttctctct
attcaaaacaattacttaaatgcattcagtaaaaatgacatagaaaaatataaaatgctg
aagaatcttgaggctggtatgaacatgtatgactgttcatgtgactttttagctttcatg
acaagtgacatgaagaattatcgagtcacatttggagacgagctcaagtcttacatctgt
cactcgcctgatgctgcaagaggaaagactatagcggatgcaaggttatcagtgtttgag
tgccacacggctttagctttgtctttactctgcttaggcatcctggcagtgtttctgctc
tttgccggactctgtcacaggttcaatgtgatgtggtacatgaagatgacctgggcctgg
ctgaaagctaagaagaagccaaagttaaaaaaggaagagcttgagtatgacgccttcgtt
tcttacagcgagatggactctggttgggtggaggcacatctgatcccggagctcgaacag
tccgagcctccagtccgcctgtgcctacacaagagagactttgttcctggaggctggatc
ttggacaacatcatgaacgccatagagaagagtcacaaaacattgttcatcatttcaaag
cattttgtcaggagtgaatggtgcaagtatgagctggactacacacattttagattgttt
gaccggaacatcgacacagctgtgctgattctgttggagcccattgacaaagagaccatc
cccaaaaagttctgtaagctgcggagagtcatgaactccaggacatacctggagtggcct
gatgaagacaaccagatccccaggttctggcaaagtttgagagcagctattagaagacct
gtggacatcattagattcaatgtagatgaatag

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