Scomber japonicus (chub mackerel): 128379964
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Entry
128379964 CDS
T09718
Name
(RefSeq) toll-like receptor 2
KO
K10159
toll-like receptor 2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04145
Phagosome
sjo04620
Toll-like receptor signaling pathway
sjo05132
Salmonella infection
sjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128379964
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128379964
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128379964
09171 Infectious disease: bacterial
05132 Salmonella infection
128379964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128379964
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128379964
04054 Pattern recognition receptors [BR:
sjo04054
]
128379964
04090 CD molecules [BR:
sjo04090
]
128379964
00536 Glycosaminoglycan binding proteins [BR:
sjo00536
]
128379964
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Phagocytosis
Toll-like receptors
128379964
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of breast milk
128379964
Pattern recognition receptors [BR:
sjo04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
128379964
CD molecules [BR:
sjo04090
]
Proteins
128379964
Glycosaminoglycan binding proteins [BR:
sjo00536
]
Hyaluronan
Cell surface receptors
128379964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_5
LRR_1
LRR_9
Motif
Other DBs
NCBI-GeneID:
128379964
NCBI-ProteinID:
XP_053195579
LinkDB
All DBs
Position
2:complement(13603401..13607443)
Genome browser
AA seq
790 aa
AA seq
DB search
MRTVVFLMFVLLSMTDSVSRPQCHSCERTSCKCSRQNLTKVPAVPSHVTTELDLSFNRLG
KITSDDFIAYTSLRCLIISNNRIRVIEEPAFDPLTNLEKLDLSSNRLDSLSVGWFKNLVS
LQYLNLVGNMYKTLGQGNLFQSLKKLKFLHIGGPHLQSVRKSDFSGLSKLEELFFDGEKL
QVYAEGSLRQIGHISHVTLGLNGPFMTNPALVKVILTDVAHPNTTLTFTDTKFYKEDQMS
PIHVVSDSGTKSLILKNSTMSITASVTLLKMLSQSDITMLAIEDTKIEYIIFGPPTFLPK
VDHLEVIIFKNIDIPQYYNFPVLPLLKPLLERVQRLSLINSKLFAIPCLLSVNVVDLEFF
DITDNMITDLVLREMLCDGKFDHFNLQTINISRNNLHSINSQLFTKLHNLKNIDMSGNMF
YTMPETCNWPPNLQYLNLSSMHLGIVTSCLPTSLRIIDLSYNDLKAFNIELPLLTDLYIS
GNKMYSFPDGDLYPRLSFLSIQNNYLNAFSKNDIEKYKMLKNLEAGMNMYDCSCDFLAFM
TSDMKNYRVTFGDELKSYICHSPDAARGKTIADARLSVFECHTALALSLLCLGILAVFLL
FAGLCHRFNVMWYMKMTWAWLKAKKKPKLKKEELEYDAFVSYSEMDSGWVEAHLIPELEQ
SEPPVRLCLHKRDFVPGGWILDNIMNAIEKSHKTLFIISKHFVRSEWCKYELDYTHFRLF
DRNIDTAVLILLEPIDKETIPKKFCKLRRVMNSRTYLEWPDEDNQIPRFWQSLRAAIRRP
VDIIRFNVDE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgagaactgtggtatttctgatgttcgtcctcctgtcgatgactgacagcgtctccaga
ccacagtgtcacagctgtgaacgaacatcatgtaaatgctcaagacaaaacctgactaaa
gtccccgcagtcccctcgcacgtcaccactgagcttgacctctcgttcaacagactgggg
aaaataacgagcgacgactttattgcatacaccagtttaaggtgtttgatcataagtaac
aacagaatccgagtgatcgaggagccagcatttgacccgctgaccaatttggagaaactg
gacctatcctcaaatagactggattccttgtctgttggatggtttaagaacctagtatcc
cttcagtacttgaatcttgtggggaacatgtataaaactctggggcaaggcaatctcttc
cagtcgctgaagaaattaaagttcctacatatcggtggacctcaccttcagtctgtcaga
aaaagtgacttttctgggctcagcaaacttgaagaattattttttgatggggaaaaactg
caggtctatgcagaaggaagtttgagacaaattgggcatatcagccatgtgacacttggt
ctgaatggtccatttatgacaaatcctgcacttgtaaaagtcatactgactgatgttgca
cacccgaacacaacactgactttcactgacacaaagttctacaaagaggatcaaatgtcc
ccaattcatgtggtcagtgacagtggtactaaaagtcttattttgaaaaattcaaccatg
tcaattacggctagtgtgacacttttgaaaatgctgtcacaatctgatataactatgctg
gcaattgaagatacaaaaatagaatatattattttcggtccccctacgtttctcccaaag
gttgaccatttggaggttattatctttaaaaacattgacatccctcaatactacaacttc
ccagtcctccctctcctgaaacctctcttggaaagagtgcaaaggcttagtttgataaac
tccaagttgttcgctattccttgtttgctctctgttaatgtcgttgacctggagtttttc
gacattactgacaatatgatcactgatctggtcctgagagaaatgttgtgcgatggcaaa
tttgatcattttaatctgcaaaccattaatatcagcaggaataacctgcactcaataaac
agccagctcttcaccaaactacataaccttaaaaacatcgacatgagtggaaatatgttt
tatacaatgcctgagacttgtaactggccaccaaatctccaatatttaaacctttcatca
atgcatttaggaattgtgacctcttgtctaccgacgagtttacggattattgatctatcg
tacaatgacttgaaggcgttcaacatcgaactacctcttctcacagatttatacatctct
ggaaacaaaatgtatagtttcccagatggtgatttatatcctcgtctgtcatttctctct
attcaaaacaattacttaaatgcattcagtaaaaatgacatagaaaaatataaaatgctg
aagaatcttgaggctggtatgaacatgtatgactgttcatgtgactttttagctttcatg
acaagtgacatgaagaattatcgagtcacatttggagacgagctcaagtcttacatctgt
cactcgcctgatgctgcaagaggaaagactatagcggatgcaaggttatcagtgtttgag
tgccacacggctttagctttgtctttactctgcttaggcatcctggcagtgtttctgctc
tttgccggactctgtcacaggttcaatgtgatgtggtacatgaagatgacctgggcctgg
ctgaaagctaagaagaagccaaagttaaaaaaggaagagcttgagtatgacgccttcgtt
tcttacagcgagatggactctggttgggtggaggcacatctgatcccggagctcgaacag
tccgagcctccagtccgcctgtgcctacacaagagagactttgttcctggaggctggatc
ttggacaacatcatgaacgccatagagaagagtcacaaaacattgttcatcatttcaaag
cattttgtcaggagtgaatggtgcaagtatgagctggactacacacattttagattgttt
gaccggaacatcgacacagctgtgctgattctgttggagcccattgacaaagagaccatc
cccaaaaagttctgtaagctgcggagagtcatgaactccaggacatacctggagtggcct
gatgaagacaaccagatccccaggttctggcaaagtttgagagcagctattagaagacct
gtggacatcattagattcaatgtagatgaatag
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