Scomber japonicus (chub mackerel): 128380118
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Entry
128380118 CDS
T09718
Symbol
ogdhb
Name
(RefSeq) 2-oxoglutarate dehydrogenase complex component E1 isoform X1
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00020
Citrate cycle (TCA cycle)
sjo00785
Lipoic acid metabolism
sjo01100
Metabolic pathways
sjo01200
Carbon metabolism
sjo01210
2-Oxocarboxylic acid metabolism
Module
sjo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sjo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
128380118 (ogdhb)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
128380118 (ogdhb)
Enzymes [BR:
sjo01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
128380118 (ogdhb)
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
128380118
NCBI-ProteinID:
XP_053195791
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Position
19:28292521..28326847
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AA seq
1022 aa
AA seq
DB search
MHRLRTTVSRLRPLTAAQTAQNLSQPRTLGVEGGLRTFQPARRQSTSVVAEPFLNGTSSN
YVEEMYYAWLENPRNVHKSWDIFFRNANAGAPPGAAYQSPPPLSGTTQGLASVQALVGSQ
PNVEKLVEDHLAVQTLIRAYQVRGHHIAKLDPLDISCVDFDDAPCTVGFQNVGLYGLAES
DLDKVFRLPTTTFIGGNESALPLREIIRRLEASYCQHIGVEFMFINDVEQCQWIRQKFET
PGVMQFSLEEKKTLLARMIRSTRFEEFLQRKWSSEKRFGLEGCESLIPALKTIIDKSSQS
GVESVIMGMPHRGRLNVLANVIRKDLDQIFCQFDSKLEAADEGSGDVKYHLGMYHKRMNR
VSNREVSMSLMANPSHLEAVDPVVQGKTKAEQFYCGDNEGKRVMSVLIHGDAAFAGQGIV
YETFHLSDLPSYTTYGTIHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNADDP
EAVMYVCNVAAEWRNTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIKKQKGVLQKF
AEKVIAEGVVTAQDYEEEVARYDKICEEAYTRSKDEKILHIKHWLDSPWPDFFTLEGQPK
SMSCPSTGISEEELGHIGKIASSVPVEDFTIHGGLSRILKGRAKMVSQRVCDWALGEYMA
FGSLLKEGIHVRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHMSPNQAPYTVCNSSL
SEYGVLGFELGFAMASPNALILWEAQFGDFNNTAQCIIDQFISSGQAKWVRQNGIVLLLP
HGMEGMGPEHSSARPERFLQMCNDDPDVFPKMSEDFAMRQLYDCNWIVVNCSTPANYYHV
LRRQIQQPFRKPLIVFTPKSLLRHPEAKSSFDEMLPGTHFKRIIPDDGPPAANPEKVKRI
VFCSGKIYYELTRERKNRGMDETVAVVRIEQLSPFPFDLVKAETERYSNADLVWCQEEHK
NQGYYDYVKPRIRTTINHSQPVWYAGREPASAPATGNKQTHLTELQRLLDNAFGLDAFSG
KL
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgcttaaggactacagtttcgaggcttcggcctttaacggctgcacagacagca
cagaacctctcacagcccaggacattgggggtcgaagggggcttaaggacgtttcagccc
gcaaggcgccagagcacatctgtggtggctgagccctttcttaatggcaccagctcaaac
tatgtagaggagatgtactatgcatggttggagaatcccaggaatgtgcacaagtcgtgg
gatatatttttccgcaatgctaacgccggggctccacctggtgcagcttaccagagccct
ccacctcttagtgggaccactcagggactggccagtgtccaggcactggttggatctcag
cccaatgtggagaagctggtggaggatcatcttgcagtccagacactgatacgagcatac
caggtacgagggcatcacatagcgaagttggacccactggacatcagctgtgtagacttt
gacgatgcaccgtgcaccgttggtttccagaacgttggtttatacgggctggctgaatca
gacctcgacaaagtgttcaggcttcccaccaccacgtttatcggcgggaacgagagcgct
ctgcctctcagggagatcatacgacgcctcgaggcgtcgtactgtcagcacatcggagtg
gagttcatgttcattaacgacgtggagcagtgccagtggatccgacagaagttcgagacg
cctggagtcatgcagttcagtctggaggagaagaagactctgctggccagaatgatccga
tccaccaggtttgaagagtttctgcagaggaagtggtcgtcggagaagcgtttcggtctg
gagggatgcgagtcgctgatcccggcgctcaaaaccatcatcgataaatccagccagagc
ggagtggagagcgtgatcatgggaatgcctcacagagggagactcaatgtgctcgctaat
gtgatccggaaagacctggaccagatcttctgccagttcgactctaaactagaagctgca
gatgagggttctggtgatgtgaaatatcacttggggatgtatcacaagaggatgaaccgg
gtcagcaacagggaggtctccatgtcgctgatggccaacccgtcccacctggaagccgtg
gaccccgtggtgcaggggaagaccaaagctgagcagttctactgcggagacaacgaggga
aagagagtgatgtctgtcctgattcacggcgatgcagcgtttgccggtcagggtatcgta
tacgagacgttccacctgtccgacctgccgtcctacaccacatacggcaccatacatgtg
gtggtcaacaaccagatcggtttcaccactgatcccaggatggctcgttcgtctccgtat
cccacagacgtagctcgggtggtcaacgctcccatctttcacgtcaacgccgacgacccg
gaggctgtgatgtacgtgtgcaacgtagcagccgaatggaggaacaccttccataaagac
gtggtcgtagatctggtgtgttacaggagaaacggccacaacgagatggacgagcccatg
ttcacacagccgctgatgtacaagcagatcaagaagcagaaaggagtcctgcagaagttt
gcagaaaaagtcatcgctgagggagtcgtcacagctcaggactacgaggaggaagtcgca
aggtacgataaaatctgtgaggaagcttacactcgctccaaagacgagaagatccttcac
atcaaacactggctggactcaccgtggcctgatttcttcaccctggagggtcagcccaaa
agtatgagctgcccttctaccggcatcagtgaagaagagctcggccatattggaaaaatc
gcttcctctgtgccggtggaagacttcaccatacatggaggtttaagtcgcatcttaaag
ggccgagccaagatggtgagccagcgagtgtgtgactgggctctcggagaatatatggcg
tttggctctctgctcaaagaagggatccacgttcgcctcagtggacaggatgtggagagg
ggaaccttcagccatcgacatcatgttctccacgaccagaacgttgataagaggacctgc
atcccgatgaatcacatgtccccaaatcaggctccgtacactgtctgcaacagctctctg
tctgagtatggagtactaggttttgagttaggctttgccatggcgagccccaacgctctg
attctgtgggaagcccagttcggagactttaacaacacggctcagtgcatcatcgaccag
ttcatcagctcaggccaggccaagtgggtccgccagaacgggatcgtgctgctgcttcct
cacggcatggagggaatgggtccagagcactcgtctgcccgccctgaaaggttcctgcag
atgtgcaacgacgaccccgatgttttccctaaaatgtcagaggactttgcgatgcgtcag
ctgtacgactgtaactggatcgtcgtcaactgctcgactcctgcaaactactaccacgtt
ctccgcagacagatccagcagcccttcaggaagccactgatagtttttactcccaagtca
ctgttgcgccaccctgaggccaagtccagctttgatgaaatgctgccaggaactcacttc
aagcgtataatcccagacgacggtcctccagccgccaacccagagaaggtgaagagaatc
gttttctgctccggcaaaatctactacgagcttacccgcgaacgcaagaacagaggcatg
gatgaaaccgtagctgtggtccgcatcgaacagttgtcgccgttcccctttgacctggtg
aaagcagagacggagcgttattcgaatgcggatctggtgtggtgtcaggaagagcacaag
aaccagggctactacgactacgtcaagcctcgcatccgcaccaccatcaaccactcccag
ccagtttggtacgctggccgtgagcctgcctcagctccagccactgggaacaaacagact
cacctcacggagctgcagcgtttactggacaacgcattcggtctggacgcgttctcagga
aaactctaa
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