Scomber japonicus (chub mackerel): 128380608
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Entry
128380608 CDS
T09718
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00280
Valine, leucine and isoleucine degradation
sjo00650
Butanoate metabolism
sjo00900
Terpenoid backbone biosynthesis
sjo01100
Metabolic pathways
sjo03320
PPAR signaling pathway
Module
sjo_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
128380608 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
128380608 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
128380608 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
128380608 (hmgcs1)
Enzymes [BR:
sjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
128380608 (hmgcs1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
128380608
NCBI-ProteinID:
XP_053196453
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All DBs
Position
19:3346495..3359325
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AA seq
515 aa
AA seq
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MPGSAPINCLGPWPKDVGVVAMELYFPSQYVDQTELEQFDGVAAGKYTVGLGQARMGFCS
DREDINSLCLTVVQRLMEKNGLSYDSIGRLEVGTESIIDKSKSVKTVLMQLFEDSGNTDV
EGIDTTNACYGGTAALFNAVNWVESSSWDGRYALVVAGDIAVYASGNARPTGGAGAVAML
VGPNAPLAFERGLRGTHMQHAYDFYKPDLVSEYPVVDGKLSIECYLSALDRCYSVYRNKI
HAQWQREGSEKCFSLEDFGYLIFHSPYCKLVQKSLARLMLNDFLNQPNPNTETGPFTGLD
AFRDVKPEDTYFDRDVEKAFMKASADLFERKTKPSLLISNQNGNMYTPSVYGCLASLIAQ
HTAAEIAGQRVGVFSYGSGFAATLYSLRVTQDHTPGSALDKLVSSMSDLKARLDSRQKVS
PAVFSESMKLREETHHLASYVPRSAVEDLFPGTWYLTRVDEKHRREYARRPLDDDLPAEP
ELVRSSTGTEHIPSPAKKMPRIPAATSDPEAAVSN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatcagctccaattaattgcttgggaccatggcccaaagatgtgggtgttgtt
gccatggaactgtacttcccgtctcagtatgtggaccagacagagctagagcagtttgat
ggtgtagcagctggtaaatatactgtgggcctggggcaagctcgtatgggcttctgctca
gaccgtgaggacatcaactccctgtgcctgacagtggtgcagaggctgatggagaagaat
ggcctgtcctatgacagcataggtcgactagaggttggcactgagagcattattgacaag
tccaagtctgtgaagacagttcttatgcagctgtttgaggattctggcaatacagatgtg
gagggcattgacaccacaaacgcctgctatggtggtaccgctgcactattcaatgctgtc
aactgggtggagtccagctcgtgggatggccgttatgctctggtggtagcaggggacatt
gctgtctacgcctcagggaatgccaggcctacaggtggcgctggtgcagtggccatgctg
gttggacctaatgctcctctggcctttgaacgaggtctgagaggaacccacatgcagcat
gcatatgacttctacaagcctgaccttgtgtcagagtatcctgtggtggacggcaagctg
tctatagagtgctacctgagtgccttggaccgctgctactctgtataccgcaacaagatc
cacgcacagtggcaaagagagggttctgaaaagtgcttcagcctggaggactttggttat
ctaatcttccactctccatattgcaagctggtgcagaagtcgctggctagactgatgctc
aatgactttttgaaccaacccaaccccaacacagagacgggacccttcacaggccttgac
gccttcagagacgtgaagccagaagacacctactttgaccgggatgtggagaaggccttc
atgaaggccagtgcagacctgtttgagaggaagaccaagccctccctgctcatctccaac
cagaacgggaatatgtacaccccctctgtctacggctgcctggcatcactcattgcacaa
cacacagctgcagagatagcaggtcagagggttggagtgttctcctatggatcagggttt
gctgccactttgtattctctgagagtcacacaggatcacacacctggctctgctctggac
aaacttgtgtccagtatgagtgacctgaaggcgagactggactcgaggcaaaaggtttct
cctgctgtcttctctgagagcatgaagctcagagaggagacacaccaccttgccagttat
gtccctcgaagcgcggtggaggatctgttcccaggaacatggtacctgacacgtgtggat
gagaaacaccgcagagaatacgccaggagacctctggatgatgacctccctgcagagcca
gagcttgttcgctccagcactggcaccgagcatatccccagtccagccaagaagatgcct
cgcatccctgcagccacctctgacccagaggctgctgtcagcaactga
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