Scomber japonicus (chub mackerel): 128381916
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Entry
128381916 CDS
T09718
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04140
Autophagy - animal
sjo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128381916 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128381916 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128381916 (plekhm1)
Membrane trafficking [BR:
sjo04131
]
SNARE
SNARE associated proteins
Others
128381916 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_11
Motif
Other DBs
NCBI-GeneID:
128381916
NCBI-ProteinID:
XP_053197928
LinkDB
All DBs
Position
20:complement(6469699..6485139)
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AA seq
1084 aa
AA seq
DB search
MLATQMPDTPQEAKDVKQIKDKLAQSLKALQKRYVTSDAVVTSEDGDANLLCSALEAIFI
HGIKSKFIRTEAGGRSRKGDRGPLPQPFFWNLLKTVTHRDVITELEKISFVGTDVGRCRA
WLRLALNHGLLECYLVSLFRENSKLRAHYQPDALLLNAEEREVLLSYLQGLASLTFSLSY
KSAVLNEWTNTPLALAGLCPLYQADVLDLPLNGGGDHPPSKSTYKESWDTVSQSSSSSDA
QDMQRVCTVLTARDSSALQGGRTALNSSNLSLDTTGSSQLSSSLSSDSLLQGQDPRSPTG
EQWSSCDLDMHLNNSTKRAQKDSLTDYRESGHCSQDSMREDSFVSSTGPDQLSETAVFIG
SDSEAQTPSQEFSEPPREPEPLSDPEPPPTSTSAFPPLHHENHINQSPSEDCNNALSEID
AQSELVEPAERVQTTRTEESSELIQEEKEAESLEKTSVRPVTLRSTSVLSRKLSSDSLSH
HHSWISEDDIYKPRLDEVSDQEEFLPSAPTPEPKVSQSPPSVVHRRQTGQFNPFRGLLKL
GHLERRGAMGLWRDHYCELSPFEFRLYLNAEERTCCDNCSLVRCEDVRITTSEGRFELFF
PGKRLHLRAANHDEAEDWVDRIVEAVNKCRPVSRIDEQWEVLQPTNENGVDDRTLSSASS
APSSPERGILSSDAGTGRGQETPPPPQEFNWTRTTDVETDAIKEAVLYLSTDPEARTWVP
LVFSLSLEALKGFRVQEGRKLQRVSHSIEEIRDVVPDVSVGGPAFFKLLTVKETLRLRAE
NADEARSWRSLIRGALDSYLDSGEDGGAEETPASARLQGVTGNLHRLVQHRLKEDGSLLV
HLCTVPSEKGLDTQNFKCAGCPQLIGPSRSRARLCEFSGRYYCESCHHGDTTIIPSRMVH
NWDLRQREVSKKALWLLAQVEQEPLLNLEQLNPELEKHSESMCQAHSLRQRLRLLGDYLL
TCRSGTCKKLQAKMQQRTYLLESSHLYSVMDLRQIAEGEYATYLNTFVQYASKHVFQCDL
CTQRGFICQICHADDIIFPFQFDSTTRCKDCKAVFHLACKAAEDSCPRCLRMRKYLERDL
QDLL
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgctagccacacagatgccagatacgccacaagaggctaaagatgtcaaacagatcaaa
gacaagttagctcagtcactcaaggccctgcagaagcgctacgtgacgtcggacgccgtg
gtaaccagcgaagatggagacgctaacctcctctgctccgccctggaggccatcttcatc
cacgggatcaagagcaagttcatccgcactgaggccgggggtcggagcaggaaaggagac
agaggaccccttcctcagccgttcttctggaacctcctcaagaccgtcacccaccgcgat
gtgatcacagagctggagaagatcagcttcgtgggtacggacgtgggtcgctgccgtgcg
tggctccgcctggccctcaaccacggcctgctggagtgctacctggtctccttgtttcgg
gagaactccaagctacgagctcattatcagccggacgccttgctcctgaacgcagaggaa
cgagaggttctgctcagctacctccagggtctcgcctcgctcaccttcagcctttcttac
aagtccgccgtcctcaacgagtggaccaacacgcctctggccctcgccggactctgcccc
ttgtatcaggcagatgtgctcgacttgcccctcaatggcggaggagaccaccccccctct
aaatccacatacaaagaatcatgggatacagtatctcagtcgtcgagctcatcggacgct
caggatatgcagagagtgtgtacggtgctgacggcgagggattcaagtgcgttacaaggg
ggtcggactgcactcaactcctctaacttgagtctggacactacaggctcatctcagctc
tcctccagtttgagctccgacagcctcctgcaggggcaagaccctcgcagcccgacgggg
gagcagtggtcgtcatgtgacctggacatgcacctgaataacagcaccaagagggcacag
aaagattcgctgactgactatcgggagagcggtcactgcagtcaggactccatgcgtgag
gactccttcgtctccagcacgggtcccgatcagttatctgagacggccgttttcatcggc
tccgacagcgaggcccagacgccatcgcaagaattctcagagccgccacgagaacctgag
ccgctttctgatccggagccaccgccaacatcaacatccgcctttccaccgctccaccac
gagaaccatattaaccagtcgccctctgaagactgcaataacgccttgtcggagattgat
gcacagtcggagcttgtggagcctgcagagagagtacaaacgacacgtacagaggagagt
agtgagctcattcaggaggagaaggaagcagagagcttggagaagacttcagtacgcccg
gtcacacttcgctccaccagcgtgctgagcaggaaactgtcctcagattcactatcacac
caccattcctggatctcggaggacgacatctacaaaccacgtctggatgaggtttccgac
caggaagagtttcttccctccgctcccacacctgagcccaaagtctcccagtcacctccc
agcgtcgtccatcgcagacagacagggcagttcaacccgttccgaggcttgctgaagctc
ggccacctggagcgtcgaggagcgatgggattgtggcgcgaccattactgcgaactgtct
cccttcgagttccgcctctacctcaacgcggaggagcggacgtgctgcgacaactgctct
ctggtgcgatgcgaggacgtgcgcatcaccacatccgaaggccgcttcgagttgttcttc
cccgggaaacgactccacctccgggcggccaaccacgacgaagcggaggactgggtggac
cggatcgtggaggcggtgaacaaatgccggccggtgtctcgcattgatgagcagtgggaa
gtcctgcaacccaccaacgagaacggagtggacgatcgtacattatcctccgcatcctcc
gccccctccagccccgagcgaggcatcttatcctccgacgcagggacaggaagagggcag
gagacgccgccccctccacaggaattcaactggactcggaccactgatgtagaaacagac
gccatcaaagaagccgtgttgtatttatcgacagatcccgaagctcggacgtgggttcct
ctcgtgttctcgctctccttggaggcgctaaaaggttttcgggtacaagagggaagaaag
ctgcagcgggtatctcactccatagaggaaattcgtgatgttgttccagatgtttctgta
ggagggccggcgttttttaaactcctcaccgtcaaggagacgctcagactgcgggcggag
aacgcggacgaggctcgctcatggaggagtctgatacgaggagctttggattcgtacctg
gacagcggagaggatggaggcgccgaggagacgcccgcgtctgcacgtctgcaaggggtg
acggggaacctccacagactggtgcagcacagactgaaggaagacgggtcactcctggtt
cacctgtgcaccgttccctctgagaaagggctcgacactcagaacttcaagtgtgcaggc
tgccctcagctgatcggaccgtcccggagcagagccaggctatgcgagttctcgggccgg
tactactgcgagtcctgtcaccatggcgacactaccatcataccttcacgcatggtgcac
aactgggacctcagacagcgagaggtatctaagaaggccctgtggctgctggctcaggtg
gagcaggagcctttgttgaacctggagcagttgaaccctgagttggagaagcactctgag
tcgatgtgtcaggctcacagcttgaggcagagattacgtctgctgggcgactatctgctg
acctgccgcagcggaacctgcaagaagctccaagccaaaatgcagcagcgaacgtacctg
ttggagtcgagccatctttacagcgtcatggatttacgacaaatagcagagggcgaatat
gcaacctacctgaacacatttgtgcagtacgcctccaaacatgtgttccagtgtgatctg
tgcacgcagcgcggcttcatctgccagatctgccacgctgatgacatcatcttccctttc
cagttcgacagcaccaccaggtgtaaagattgtaaagctgtgtttcatctggcctgcaaa
gctgcggaagactcttgtccacgctgtctacgaatgaggaaatacctggagagggatctg
caggatttactgtaa
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