Scomber japonicus (chub mackerel): 128382304
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Entry
128382304 CDS
T09718
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00052
Galactose metabolism
sjo00510
N-Glycan biosynthesis
sjo00513
Various types of N-glycan biosynthesis
sjo00514
Other types of O-glycan biosynthesis
sjo00515
Mannose type O-glycan biosynthesis
sjo00533
Glycosaminoglycan biosynthesis - keratan sulfate
sjo00601
Glycosphingolipid biosynthesis - lacto and neolacto series
sjo01100
Metabolic pathways
Module
sjo_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
sjo_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
128382304
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
128382304
00513 Various types of N-glycan biosynthesis
128382304
00515 Mannose type O-glycan biosynthesis
128382304
00514 Other types of O-glycan biosynthesis
128382304
00533 Glycosaminoglycan biosynthesis - keratan sulfate
128382304
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
128382304
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sjo01003
]
128382304
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128382304
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128382304
Enzymes [BR:
sjo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
128382304
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
128382304
2.4.1.90 N-acetyllactosamine synthase
128382304
Glycosyltransferases [BR:
sjo01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
128382304
Membrane trafficking [BR:
sjo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
128382304
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of breast milk
128382304
BRITE hierarchy
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
128382304
NCBI-ProteinID:
XP_053198279
LinkDB
All DBs
Position
21:16360160..16362482
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AA seq
352 aa
AA seq
DB search
MLKKLFKFLALSGLLTLAFFVGFFLYSKDDAFTFFVNLYHKAGGNHSLILTVEERIQEVM
KMKTDQMLIHRQNFTNKPLVPCPDKPPNLRGPLKVDFIFTRTMDEVKKKIGDPLQKGGRY
KPPDCISRHKVAVIIPFRNRHEHLKQWLYFVHPILMRQQLDYGIYVINQYGDGVFNRAKL
MNIGYTEALKQYDYACFVFSDVDLIPLDDRNIYRCFDNPRHLSVAVDKFNYRLPYKTIFG
GVSALSKSQFLKINGYPNTYWGWGGEDDDVYKRIVYHGMSLSRPDMTSGRYKMIKHVRDK
HNKPNPKNAIKMQQTRWTMDKDGLNTLKYTVKEIVKEPLYTFVTVDIDAPPG
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaactttttaaattcctggcactttctggtttattgactctggcatttttt
gttgggttttttctttacagcaaagatgacgcttttactttttttgttaacttgtatcat
aaagcaggaggaaatcactcactcatcttgacggtagaagaacgcatacaagaagtgatg
aaaatgaagactgaccaaatgctgatacatagacaaaactttaccaacaagcctttggta
ccttgccctgacaaaccaccaaatcttagaggtcctctcaaagtggattttatttttaca
cgaacaatggatgaggtgaaaaagaagattggtgatcctctacagaagggaggacgttat
aagccaccagactgtatctcacgacacaaggtggcagtcatcatcccatttcgaaatcgg
catgagcacctgaagcagtggctttattttgtccatcctatattgatgcgacagcagttg
gactacggtatttatgttatcaaccaatatggagatggagtgttcaaccgagctaaactg
atgaatataggctatactgaggcattgaagcaatatgactatgcatgctttgtcttctct
gatgttgacttgattcctcttgatgatcgcaacatttatagatgttttgacaatcctcga
cacttgtctgttgctgtggacaaatttaactataggttaccatataagaccatctttgga
ggggtttcagcattgtccaagagtcaattcttgaagattaatggctacccaaacacttac
tggggctggggtggcgaagatgacgatgtctataaacgaattgtctaccatgggatgtcc
ctttccagacctgacatgacatctggaaggtacaaaatgataaaacatgtaagagacaag
cacaataaacctaatccaaagaatgctattaaaatgcagcagaccaggtggaccatggat
aaagatggacttaataccctcaaatacacagtcaaggagattgtgaaggagccactgtac
actttcgtcactgtggatattgacgctccgccaggctga
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