Scomber japonicus (chub mackerel): 128382583
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Entry
128382583 CDS
T09718
Symbol
tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128382583 (tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
sjo04050
]
128382583 (tnfrsf11a)
04090 CD molecules [BR:
sjo04090
]
128382583 (tnfrsf11a)
Cytokine receptors [BR:
sjo04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
128382583 (tnfrsf11a)
CD molecules [BR:
sjo04090
]
Proteins
128382583 (tnfrsf11a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
128382583
NCBI-ProteinID:
XP_053198560
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Position
21:complement(15803728..15816846)
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AA seq
659 aa
AA seq
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MRLNFSTIWIFRGWITCVIVTFYAQNGVSKSLQCDEKHYLKGSRCCNKCGPGLRLYSECN
GSNETRCSKCDRGEYQPGWTQETRCLQQKFCDPGKGFMPRPENFEAEEPCRCHPNFQCFP
INCEYCERMPTCPPGHGLELDPESTNGRKICVPCKKGFFSAENSAEQCKQWTNCKAEARS
EKRPGSAQTDAVCGQHVTSAAPSWVLVSLLSVITVLCLLILLLFCYKDKLKLLSVNLRSC
VQNLKRTRIQQETLAPLYHSGAAGGIGGGPGNAKCTPCETTKLICQAPHNPADETPCTYP
TTVTDVKVSLPLTGNMTEKEGTKGKAVMEELSEGSGEPEEVSEEEEIVSVSPLLAGSCLC
VISAREPLEVGENEDCSQAVSSGIPRTCFCGGLDADERGKEEKSENERDQEKVNLYKSET
SVSSLVSLSLPLHHTSSVIPPSSPHPELCLPLSQAQARPEFKPHLKDRSLGKQEELYRLA
STDSTSTENSTPSAASVMTSVSPLMTSSSVGDLYLDKPTEASSQDHGQGLSWGDSRGNKL
SSGDSELECPPESLQSQLAEPTLTSGQVSGNNNTTFISSGQVMNFSSDVIVVYVSQTSFG
SDGAELDDAFSSPVQEEASETAQFFESSLRSPGDSIAHSTLQEETLLVREVMEERPRGK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgaacttttcaacgatatggatattccgtggctggataacatgtgtcattgtc
accttttacgcacagaacggagtctccaaatctcttcagtgtgatgaaaaacattatcta
aaaggctccagatgctgcaacaagtgtggaccaggtttacgtttgtattctgagtgcaat
ggttccaacgagactcgatgtagtaaatgtgaccgtggagaataccagcccggctggacc
caagagacacgctgtcttcagcagaagttctgtgatccaggtaagggcttcatgccaagg
cctgaaaactttgaggcagaggaaccatgtcgctgccatcctaacttccaatgctttccc
atcaactgcgagtactgtgagaggatgcccacctgcccacctggtcatggactcgagttg
gaccctgagtcaactaacggaaggaagatttgtgttccgtgtaagaaaggcttcttctct
gctgaaaacagtgctgaacaatgcaaacaatggactaattgtaaggctgaggccaggagt
gaaaaacggccaggcagtgctcagactgacgcagtgtgtggacaacatgtcactagtgca
gcaccctcctgggttctagtttcattgctgtcagtcatcactgttctctgtttgctcatc
ctgctcctcttctgctacaaggacaaactgaaattactctctgtaaatctgcgctcctgt
gttcagaatctgaagaggactagaatacagcaggagaccttggcacctctttaccacagc
ggagcagcaggaggaataggaggtggcccaggaaatgccaaatgtacaccatgtgagacg
accaaactcatttgccaagccccccacaaccctgctgatgagaccccatgcacctatccc
accactgttaccgatgtgaaggtgtcactgcccctaacagggaatatgacagagaaagaa
gggacaaaggggaaggcagtgatggaggaactgagcgaagggtctggggaacctgaggag
gtgtctgaagaagaggaaattgtgagtgtgtctccgctgttggcaggttcttgcctgtgt
gtaatttcggcacgtgagccactggaagtaggagagaatgaggactgtagccaggctgtc
agctctgggattcccagaacctgcttctgtggagggctggatgcagatgagagggggaaa
gaggaaaaaagtgagaatgaaagggatcaagaaaaggttaatctgtacaagagtgagaca
agtgtttcatctcttgtctctctgtctcttcctctccaccacacctcctctgtaatccct
ccatcgagcccacatcctgaactctgcctgccgttgtctcaggctcaggcaaggccagag
ttcaaaccccacctgaaagacaggtcactagggaaacaggaggaattatatagactggca
agcacagactccacctccacagagaatagcacccccagtgcagcttctgtgatgacttca
gtcagccctttaatgacgtcctcatctgtcggagatctctatctggacaagcccacggag
gcctccagccaggaccacggccagggactttcctggggtgacagcagaggaaacaagctc
tcttctggggactcagagctggaatgcccacctgaaagtcttcagagccagctggcagaa
ccaactcttacctcaggtcaggtgtctgggaacaacaacaccaccttcatctccagcggt
caggtgatgaacttcagcagtgacgtcatcgtcgtctatgtcagccagacgtcttttggc
agtgatggggcagagctggacgatgcattcagtagccccgtccaggaagaggccagtgag
acagctcagtttttcgagagtagtctgaggtcaccaggggactccattgcccacagcacc
ttgcaagaagagacactgcttgtccgagaagtgatggaggagcggccacgtggaaagtga
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