Scomber japonicus (chub mackerel): 128383999
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Entry
128383999 CDS
T09718
Symbol
rela
Name
(RefSeq) transcription factor p65 isoform X1
KO
K04735
transcription factor p65
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04137
Mitophagy - animal
sjo04210
Apoptosis
sjo04218
Cellular senescence
sjo04620
Toll-like receptor signaling pathway
sjo04621
NOD-like receptor signaling pathway
sjo04622
RIG-I-like receptor signaling pathway
sjo04623
Cytosolic DNA-sensing pathway
sjo04625
C-type lectin receptor signaling pathway
sjo04920
Adipocytokine signaling pathway
sjo05132
Salmonella infection
sjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128383999 (rela)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128383999 (rela)
09143 Cell growth and death
04210 Apoptosis
128383999 (rela)
04218 Cellular senescence
128383999 (rela)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128383999 (rela)
04621 NOD-like receptor signaling pathway
128383999 (rela)
04622 RIG-I-like receptor signaling pathway
128383999 (rela)
04623 Cytosolic DNA-sensing pathway
128383999 (rela)
04625 C-type lectin receptor signaling pathway
128383999 (rela)
09152 Endocrine system
04920 Adipocytokine signaling pathway
128383999 (rela)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128383999 (rela)
09171 Infectious disease: bacterial
05132 Salmonella infection
128383999 (rela)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128383999 (rela)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
128383999 (rela)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
128383999
NCBI-ProteinID:
XP_053199553
LinkDB
All DBs
Position
22:6226162..6237929
Genome browser
AA seq
630 aa
AA seq
DB search
MEVTRNNAVYGWGPAQPNPVQAANPFIEIIEQPKQRGMRFRYKCEGRSAGSIPGEKSNDT
TKTHPAIKVHNYNGPLRIRISLVTKNAPHKPHPHELVGKDCKHGYYEADLQERRIHSFQN
LGIQCVKKKDVNEAITCRLQTNNNPFNIPEAKVWEEEFDLNSVRLCFQASITLSTGEFIP
LEPRVSQPIFDNRAPNTAELKICRVNRNSGSCKGGDEIFLLCDKVQKEDIEVRFFQDTWE
GKGTFSQADVHRQVAIVFRTPPYRDTNLTEPVRVKMQLRRPSDREVSEPMDFQYLPADPD
EYRLSEKRKRTGDMFQSLKLGPVLSSVSIPTDRRHISPARRQVTAKPQTMNTQTAAVVPP
SATGAKPQPMFSYMQQGQLFSAQPKVEASSSSSTTTQSQTWKIMESLNLGPQPKATAVPS
FTMSQAPAFSSTTTSTANQDYTTVNLSDLHEFFPNFAGVMSQDSGASQGSMAPSQTSSPL
TLQGSQFRDEAPLPVDDIPEFPSFPGQAPGTLDSLDMEDFVDLLNPRLMGDSGNSTSMLA
QASCQQASAPSSSTAAQNTSDPASTPGSTWMNYPHSIVNLLQNEGMMDLIPNNNHRPAVL
DEFDELMSADEDRLISILNSQTGFVSGHPT
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggaggttactcgcaacaacgcggtgtatggatgggggccggcccaacccaacccagtc
caagcagcaaaccccttcatagagatcatcgagcagccgaaacagagggggatgaggttt
agatataaatgtgaggggcgttcagccggcagcatacctggagaaaaaagcaacgacacc
accaagactcacccagccattaaggtgcacaactacaacggccccttgcgaattcgcatc
tccttggtgacgaagaacgcaccgcacaagcctcatccccacgaactggtcgggaaagac
tgcaaacatggctactacgaggccgacctgcaggagagacgaatacacagttttcagaat
ctgggcatacagtgtgtaaagaagaaggatgtgaatgaagccatcacttgcaggctgcag
accaataataaccccttcaacattcctgaggctaaggtgtgggaggaggagtttgacctg
aattcagtgagactttgcttccaggcctccatcactctgtcaacaggggagtttatccca
ctggagcccagagtatcacagcccatctttgataacagagccccaaacacagctgagctg
aagatctgccgagtcaaccgcaactctggaagctgcaaaggaggggatgaaatctttctg
ctgtgtgacaaagtgcaaaaagaggacatcgaggtgcgtttcttccaggacacttgggag
ggaaagggtactttctcccaggccgatgtccacaggcaggtggccattgtgttccgcaca
ccgccgtaccgtgacactaacctcaccgagcccgttagagtcaagatgcagctccgcaga
ccatctgaccgcgaagtcagcgagccaatggacttccaatacctgcccgctgacccagat
gaatacaggctgagtgagaagcgaaaacgtacaggggacatgttccagagcctgaagctg
gggcccgttctgtcgagtgtgtccattccgacagatagaagacacattagcccggcgagg
agacaagtgacagccaagcctcaaacaatgaatacacaaactgcagcagtggtgccccct
agtgccacaggagcgaaaccacagcccatgttctcttacatgcagcaaggccagctcttc
tcagcccagcctaaggtagaggcctcctcctcaagctccactacaactcaaagccaaaca
tggaagatcatggagagcctgaacctgggccctcagcccaaagccactgcagtgcccagc
ttcacaatgagccaggcaccagccttttcctccaccaccacctccacagccaaccaggac
tacacaaccgtcaacctgtcagacctgcatgagttctttcccaactttgctggagtcatg
tcccaggattcaggagcttcacagggaagcatggccccctcccagaccagcagccccttg
accctccagggctctcagttccgggatgaagcaccactgccagtggatgatatcccagag
ttccccagctttccaggccaggctccaggcaccctggacagcctagacatggaagacttt
gtggaccttctgaacccccgcctcatgggtgacagtggaaacagcacctccatgcttgcc
caagcttcatgccaacaagcttccgctcccagctcctctactgctgcccagaacacttct
gaccctgccagcaccccaggaagcacctggatgaattacccccacagcatcgtcaacttg
ctccagaacgagggcatgatggacctcatacccaacaacaaccaccggcccgctgtgctg
gatgaatttgatgaattgatgtcagctgacgaggatcgtcttatttccattttgaatagc
caaaccggttttgtgtcaggacacccaacttaa
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