Scomber japonicus (chub mackerel): 128384062
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Entry
128384062 CDS
T09718
Symbol
plod3
Name
(RefSeq) multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00310
Lysine degradation
sjo00514
Other types of O-glycan biosynthesis
sjo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128384062 (plod3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
128384062 (plod3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sjo01003
]
128384062 (plod3)
Enzymes [BR:
sjo01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
128384062 (plod3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
128384062 (plod3)
2.4.1.66 procollagen glucosyltransferase
128384062 (plod3)
Glycosyltransferases [BR:
sjo01003
]
O-Glycan biosynthesis
O-linked Gal type
128384062 (plod3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2OG-FeII_Oxy
Anp1
2OG-FeII_Oxy_3
DUF6492
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
128384062
NCBI-ProteinID:
XP_053199614
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All DBs
Position
22:complement(27950251..27973977)
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AA seq
733 aa
AA seq
DB search
MAACRLLCLLALAFFPSSVSADQRRLSAENLLVITAATEETDGFNRFMRTAREFNYTVKI
LGLGEEWKGGDVARTVGGGQKVRWLKKELLKHSDKKDMVVMFVDSYDVIFASGPEELLMK
FSRLGHRVVFSAEGFCWPDQRLASKYPEVRTGKRFLNSGGFIGYASDLSTIVQQWKYKDN
DDDQLFYTKIYLDKAQRTKFNMSLDHRSRIFQNLNGAVEEVVLKFERAKVRVRNVAYDTL
PVIIHGNGPTKLQLNYLGNYVPTAWTYEDGCSSCDDDLLFFNDVADEDMPLVYFSVFIEH
ATPFMEEFLERLTTLNYPLERIRLFIHNNVVYHERHIQRFWERYRALFPDARLIGPEENL
KEDKARNMAVEACKKDPKCDYYFSIDSDVALTNPDTLRILIEENKSVIAPMLSKHGKLWS
NFWGALSPEGFYSRSEDYIEIVQGKRIGLWNVPYITQAYLVKGSILRSKLLQVSLFVDKE
MDPDMVFCRGIRDQGVFMFVTNRDEFGRLVNSANFNTSRLHPDMWQIFDNPVDWKEKYIH
ENYSKVFEDEKSFVEQPCPDVYWFPAFSEKMCDHLVETMEDHGEWSGGKHKDERLAGGYE
NVPTVDIHMNQIGFEKEWLKFLKEYIAPVTEKLYPGYYPKAQAIMNFVVRYRPDEQPYLR
PHHDSSTFTINIALNRKHDDYEGGGCRFLRYDCKVESPRKGWSFMHPGRLTHYHEGLPTT
RGTRYIMVSFVDP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctgtcgcctgctctgcctgctggctctcgccttcttcccgagctccgtgtcg
gccgatcagcggaggctctctgcagaaaacttgctggtgatcaccgcggcaacggaggag
acggacggcttcaaccgcttcatgagaacggcccgagagtttaactacactgtgaagatt
ctgggtctgggggaggagtggaagggaggtgacgtagctcggacggttggcggagggcag
aaggtccgatggttgaagaaggaactcctaaaacactccgataagaaagacatggtcgtc
atgttcgtggacagctatgacgtcatctttgcgtccgggccggaggagctgctcatgaag
ttttcccgtctgggtcacagagtggttttctcagcggagggtttctgttggccggatcag
agactcgcctccaaataccccgaagttcgcaccgggaaacgcttcctcaactctggaggc
ttcatcggttacgcctcagacctgagtacgatcgtccagcagtggaaatacaaagacaac
gatgacgatcagctgttctacaccaagatctacctggacaaggctcagcggaccaagttc
aacatgtctctggatcatcgctccagaatcttccagaacctgaacggagccgtcgaggaa
gtcgtcttaaagtttgagagggcaaaggtcagagtgaggaacgtcgcctacgacacactt
cctgttattatccacggcaacggacccaccaagctgcagttgaactatctgggtaactac
gtaccgacagcttggacgtacgaggacggctgcagtagctgtgatgacgacctgctgttc
ttcaacgacgtagctgatgaagacatgcctctggtttacttttcggtgtttatcgaacac
gcgacgccgttcatggaagagtttctggagcgactgacgactctgaactatcctctagag
aggattcgcctcttcatccacaacaacgttgtttaccacgagcgtcacatccagcggttc
tgggagcggtacagggctttgttcccagacgcccggctgatcggaccggaggagaacctg
aaggaggacaaggccagaaacatggctgttgaggcgtgtaagaaggacccaaagtgtgat
tactacttcagtattgactccgatgttgccttgacgaatccggacacactgaggatacta
atagaggaaaacaagtcagttatcgctcccatgttgtccaaacacgggaagctgtggagt
aacttctggggggctctgagtcctgaagggttctactccagatctgaagactacatcgag
atcgtgcaggggaagaggatcggtctgtggaacgtgccgtacattactcaggcctacctg
gtcaaaggaagcatcctgcgctccaaactgctgcaggtcagcctgtttgtggacaaggag
atggaccctgacatggtgttctgcagaggcatcagagaccagggagttttcatgttcgtg
acgaaccgtgacgaattcggtcgcctggtgaattctgccaactttaacacatccaggctg
cacccggacatgtggcagatctttgacaaccctgtggactggaaggagaagtatatccat
gaaaactactcaaaggtctttgaagatgagaagagcttcgtggagcagccctgtccagat
gtttattggtttcctgcgttctcagagaagatgtgtgatcatttggtggagaccatggag
gatcatggggaatggtcaggaggcaaacacaaggacgaacgtctggccggcggttatgaa
aacgttcccactgtggacatccacatgaaccagatcggcttcgagaaggagtggctcaaa
ttcctcaaagagtacatcgcccccgtcaccgaaaaactctatcctggatattaccccaag
gctcaagccatcatgaacttcgtggtgcgttaccgccctgatgagcagccgtatctgcgg
ccgcatcacgactcctccaccttcaccatcaacatcgccctgaacagaaagcacgacgac
tacgagggcggaggctgcaggttcctgcgttacgactgtaaggtggagtctcccaggaag
ggctggtccttcatgcatcccggccgcctgacacactaccacgagggcctccccaccacc
agagggacccggtacatcatggtgtccttcgtagacccctaa
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