KEGG   Scomber japonicus (chub mackerel): 128384124
Entry
128384124         CDS       T09718                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
  KO
K06752  MHC class II antigen
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04145  Phagosome
sjo04514  Cell adhesion molecules
sjo04672  Intestinal immune network for IgA production
sjo05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    128384124
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128384124
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    128384124
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    128384124
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sjo04147]
    128384124
Exosome [BR:sjo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128384124
  Exosomal proteins of epithelial cells
   128384124
  Exosomal proteins of breast milk
   128384124
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 C2-set_3 Cna_B DUF2627
Other DBs
NCBI-GeneID: 128384124
NCBI-ProteinID: XP_053199680
LinkDB
Position
22:28547122..28556797
AA seq 252 aa
MASSFLSFSLLFITVYTADGFMHYDAAHCQFNSTELKDIRFIRSWYYNRLAYTRFDSSVG
KFVGFTEYGVMNAEYWNNDTSILAQMNVARETYCQHNIGIWYNNVLTKSVKPYVRLHSET
LSAGNHPSMLVCSVYSFYPKQIIVKWLRDGQEVTSDVTSTDEMANADWYYQIHSHLEYTP
RSGEKISCKVEHASLSEPLYTDWDPPLPESQTNNIAIGASGLTLGLIFPLAGFIYYKRKS
RGQIPIPSRFLS
NT seq 759 nt   +upstreamnt  +downstreamnt
atggcttcatcctttctgagcttctccctcctcttcatcactgtctacacagcagatgga
tttatgcattatgatgcggcacactgtcagtttaactccactgagctgaaggacatcagg
ttcatcaggtcttggtattataacaggttggcgtacaccaggtttgacagcagtgtgggg
aagtttgttggattcactgagtacggagtgatgaacgcagagtactggaacaacgatact
tcaatcctggctcagatgaatgttgcgagggagacatactgccaacacaacattgggatc
tggtacaacaatgttctgactaaatcagtgaagccgtatgtgcggctgcactctgagact
ctctctgctggtaatcatccctccatgttggtctgcagcgtctacagcttctaccccaaa
cagatcatagtgaaatggctcagagacggacaggaagtcacctctgatgtcacttccact
gacgagatggcaaacgctgattggtactaccagatccactcccacctggagtacacgccc
aggtctggagagaagatctcctgtaaggtggaacacgccagcctgagtgagcctctgtac
actgactgggatccgcccctgcctgagtcacagacaaacaatatcgccattggagcgtca
ggactgaccctgggtctgatctttcctctcgctggattcatctactacaagaggaagtcc
agaggacaaattccgatcccctctagattcttgtcctga

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