KEGG   Scomber japonicus (chub mackerel): 128384137
Entry
128384137         CDS       T09718                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-K alpha chain-like
  KO
K06752  MHC class II antigen
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04145  Phagosome
sjo04514  Cell adhesion molecules
sjo04672  Intestinal immune network for IgA production
sjo05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    128384137
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128384137
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    128384137
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    128384137
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sjo04147]
    128384137
Exosome [BR:sjo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128384137
  Exosomal proteins of epithelial cells
   128384137
  Exosomal proteins of breast milk
   128384137
SSDB
Motif
Pfam: C1-set MHC_II_alpha C2-set_3 Ig_3 C2-set_2 Ig_2 I-set ig ABC_AB
Other DBs
NCBI-GeneID: 128384137
NCBI-ProteinID: XP_053199701
LinkDB
Position
22:28479053..28483167
AA seq 245 aa
MMKTMMKVMKMLELLLILSGVLCVPAEDLHEDLHIYGCSDSDGEDMYTLEGEELWYTDFK
KNRGVYPLPDFSNSFRYEEGTYENAVANQQVCKDNLKKDRNAMKDIPLESDPPSSPIIYI
RDQVELGVQNTLICHVTGFYPAPVKVYWTKNEKNVTEGTSINVPYPNKDGSFSQSSRLEF
TPQQGDMYSCSVSHPSLSQPLTRIWGVEVQQPGVGPAVFCGLGVTIGLLGVAAGTFFLIK
GNECS
NT seq 738 nt   +upstreamnt  +downstreamnt
atgatgaagacgatgatgaaggtgatgaagatgttggagttgctcctcatcctctccggt
gtcctctgtgtccctgcagaagatctacatgaggatcttcatatctacggatgttcagac
tctgatggagaggacatgtacacactggagggtgaagagttgtggtacacagacttcaag
aagaacagaggagtttaccctctgcctgacttttcaaatagtttcaggtacgaggaagga
acttatgaaaatgctgtggctaatcaacaggtctgcaaagataatctgaagaaggatcgt
aatgcaatgaaagacatcccactggaatctgatcctccttccagtcccatcatctacatc
agagaccaggtggagctcggagtccagaacacactgatctgtcatgtgaccggtttctat
cctgctcctgttaaagtctactggaccaagaacgaaaagaacgtgaccgaaggaaccagc
atcaatgttccttaccccaacaaagacggttccttcagccagtcctccagactggagttc
accccacagcagggagacatgtacagctgttcagtgtcacacccatcactgagccaacca
ctgaccaggatctggggtgtggaggtgcagcagccaggtgttggacctgcagtgttttgt
ggactgggtgtgactatcggtctgctcggtgtggcagctggaaccttcttcctcatcaaa
ggaaacgagtgcagctga

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