Sphingobium indicum UT26S: SJA_C1-25090
Help
Entry
SJA_C1-25090 CDS
T01201
Name
(GenBank) TolC-like protein
KO
K12340
outer membrane protein
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp01501
beta-Lactam resistance
sjp01503
Cationic antimicrobial peptide (CAMP) resistance
sjp02020
Two-component system
sjp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SJA_C1-25090
09132 Signal transduction
02020 Two-component system
SJA_C1-25090
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SJA_C1-25090
01503 Cationic antimicrobial peptide (CAMP) resistance
SJA_C1-25090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjp02000
]
SJA_C1-25090
02044 Secretion system [BR:
sjp02044
]
SJA_C1-25090
01504 Antimicrobial resistance genes [BR:
sjp01504
]
SJA_C1-25090
Transporters [BR:
sjp02000
]
Other transporters
Pores ion channels [TC:
1
]
SJA_C1-25090
Secretion system [BR:
sjp02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SJA_C1-25090
RTX toxin transporter
SJA_C1-25090
Multiple protein transporter
SJA_C1-25090
RaxAB-RaxC type I secretion system protein
SJA_C1-25090
Antimicrobial resistance genes [BR:
sjp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
SJA_C1-25090
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SJA_C1-25090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF7714
Motif
Other DBs
NCBI-ProteinID:
BAI97343
UniProt:
D4Z411
LinkDB
All DBs
Position
1:complement(2527762..2529228)
Genome browser
AA seq
488 aa
AA seq
DB search
MTAKVRLSGRTAFILLLSMSSALGGAAHAETLQGALAKAYRSNPTLTGARAGQRATDENV
PIQKAAGRPALDGTGSYSESILKPTISFTSPQRTLNANAQLSVPLYAGGSVRNAVRAAKT
RVAAGQADLRGTEASVFSQVVAAYMDVIRNSAVVALNQANVRALEVNLQATGDRFEVGDV
TRTDVAQSESRLALARSDLQNAEANLITARENYIALVGEAPDNLEPPPPLPGLPATPESA
VQVALKDNPDILAAQKLREAQQFDVRAAKGTVLPTVSAFTQAGYTNYLDTLTSSATGSQI
NKQASAGVQLNIPFYQGGRPAAQVRRNQALESQALEREIEVERGVIAQTRSAYASWQASL
ESIQSNQKAVEAANLSLEGVRAENSVGSRTILDILNAEQEAVNAKVQLVTARRNAYVAGF
SLLAAMGHAEADDLNLEAGTLYDPMVNYDRVKGKWFDWDFDSAPKVQSTRTVDSPAQNAN
VDPGLAQP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaaaagttcggctttcggggcgcaccgccttcatcctgttgctgtcgatgtcc
tccgccttgggcggcgcggcccatgcggaaacgttgcagggcgcgctcgccaaggcctat
cggtcgaacccgaccctgacgggagcgcgcgccgggcagcgggcgacggatgagaatgtg
ccgatccagaaggcggcgggtcggcccgcgctggatgggaccggcagctattccgaaagc
atcctcaagcccacgatcagcttcacttcgccgcagcgcacgctgaacgcgaacgcgcag
ttgagcgtccctctctatgccgggggcagcgtgcgcaacgccgtccgggccgccaagacg
cgggtcgccgccggtcaggccgatctgcgcggcacggaggccagcgtcttctcgcaggtc
gtcgcggcctatatggacgtcatccgcaacagcgcggtcgtcgcgctcaaccaggccaat
gtgcgggcgctggaggtcaatctgcaggcgaccggcgatcggttcgaggtgggcgacgtg
acccgcaccgacgtggcgcaatccgaatcccgcctggcgctggcgcggtccgacctgcaa
aatgcggaggccaatctgatcacggcccgcgaaaattacatcgcgctggtgggcgaggcg
cccgacaatctggagccgccgccgcccctgccgggcctgcccgcgaccccggaaagcgcc
gtgcaggtggcgctcaaggacaatcccgacattctggccgcgcagaagctgagggaagcg
cagcagttcgacgtgcgcgccgccaagggcacggtgctgccgacggtatccgccttcacc
caggcgggctacaccaactatctggacacgttgaccagcagcgccaccggatcgcagatc
aacaagcaggcgtcggctggcgtccagctcaatattcccttctatcagggcggccgtccg
gccgcgcaggtgcggcgcaaccaggcgctggaatcccaggctctggagcgagagatcgag
gtcgagcgcggcgtgatcgcgcagacgcggtccgcctatgcaagctggcaggcgtcgctg
gaaagcatccagtcgaaccagaaggcggtggaggcggccaacctgtcgctcgaaggcgtg
cgggcggaaaattccgtcggcagccgcaccatcctggacattttgaatgccgagcaggag
gcggtgaacgccaaggttcagctcgtgacggcgcgccgcaacgcctatgtcgcgggtttc
agcctgctggccgccatgggccatgcggaggcggacgacctgaacctggaggcgggcacg
ctctacgacccgatggtcaattacgaccgggtgaagggcaagtggttcgactgggatttc
gactccgcgcccaaggtgcaatcgacgcggaccgttgactcgcccgcgcaaaacgccaat
gtggatcccggtttggcgcagccttaa
DBGET
integrated database retrieval system