Sphingobium indicum UT26S: SJA_C2-03280
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Entry
SJA_C2-03280 CDS
T01201
Name
(GenBank) RND-family efflux transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp01501
beta-Lactam resistance
sjp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SJA_C2-03280
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SJA_C2-03280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjp02000
]
SJA_C2-03280
01504 Antimicrobial resistance genes [BR:
sjp01504
]
SJA_C2-03280
Transporters [BR:
sjp02000
]
Other transporters
Pores ion channels [TC:
1
]
SJA_C2-03280
Antimicrobial resistance genes [BR:
sjp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SJA_C2-03280
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
SJA_C2-03280
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
SJA_C2-03280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HH_EMRA
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
BAI98691
UniProt:
D4Z872
LinkDB
All DBs
Position
2:405633..407009
Genome browser
AA seq
458 aa
AA seq
DB search
MRRALCALASAAALSGCNMAPTYVRPAPPVPASLPSGPAYAPATATEKPGLPWTALIGDA
GLKTVIGRALDNNRDLRAALANVEAARALYRVQRAERLPAVTGEAAAGFTRRNDARQNSY
SADIGFSAFEIDLFGRVKNLTRSALESYLATEEGARATRIALIAETATAYATLAADQDYL
DLSRRTLANAERTLALTRSLNGAGLIGKLDVHQAETTVEQARSDIAANLTQVAQDRNALD
LLVGAPVEDALLPRSLQELTPDVAKVPAGLSSDVLLQRPDVLQAEHQLKAANADIGAARA
AMFPRISLTAAIGVASSALSSLFTGDGFAWSAAPSASMPIFGGAARGNLSYSKAQRDLSL
ARYEKAIQTAFQEVSDALAREGTIDEQQAAQQRLVLASQRSYKLAEERYRAGIDTFLNSL
TSQRSLYNAQQSAIATNLAMIRNRILLYRVIGADFREG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgccctgtgcgccctcgcttcggcggctgccctgtcgggttgcaacatggcg
ccgacctatgtccggcccgcccccccggtgcccgccagcctccccagcggcccggcctat
gcgcctgcgacggcgacggaaaaacccggcctgccctggaccgcgctgatcggcgatgcc
ggcctgaagacagtgatcgggcgagcgctcgacaataatcgcgacctgcgcgccgccctc
gccaatgtggaggccgcccgcgccctttaccgggtgcagcgcgccgaacggctgcccgcc
gtcacgggcgaggcggcagccggctttacccggcggaacgacgcccgccagaacagctac
agcgccgacatcggcttcagcgcgttcgagatcgacctgttcggccgggtgaagaacctg
acccggtcggcgctggaatcctatctggcgaccgaggaaggggcgcgggccacccgcatc
gccctgatcgcggaaacggccacggcctatgcgaccttggccgccgatcaggattatctg
gacctttcccgccggacattggccaatgccgaacgcacgctcgccctcacccggtcgctg
aacggcgcgggattgatcggcaagctggacgtccaccaggccgaaaccacggtggaacag
gcgcgcagcgacattgccgcgaacctcacccaggtggcgcaggaccggaatgcgctggac
ctgctggtcggcgcgccggtcgaagatgcgctgctgccccggtcgttgcaggaactcacc
cccgacgttgcgaaggtgccggcgggcctttcctccgacgtgctgctccagcggccggac
gtgctgcaggcggaacatcaactgaaggccgccaatgccgacatcggcgcggcgcgggcc
gcgatgttcccgaggatcagcctgaccgcggccatcggcgtagccagttcggccctgtcg
tcgcttttcacgggcgacggcttcgcctggtcggcggcgccctccgccagcatgccgatc
ttcgggggcgcggccagaggcaatctgtcctacagcaaggcgcagcgcgacctcagcctc
gcccgatatgaaaaggcgatccagaccgcctttcaggaggtgtccgacgcgctggcgcgt
gaaggcacgatagacgagcagcaggctgcgcagcagcggctggtcctcgccagccagcgg
agctacaagctggccgaggaacgctatcgcgccggcatagacactttcctcaacagcctg
accagccagagaagcctttacaacgcgcagcagagcgcgatcgcgacgaacctggcgatg
atcaggaaccgcatcctgctctaccgggtcatcggggcggatttccgggaagggtga
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