Shewanella khirikhana: STH12_02028
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Entry
STH12_02028 CDS
T06711
Symbol
pglF_2
Name
(GenBank) UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase
KO
K24336
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.115
4.2.1.135
]
Organism
skh
Shewanella khirikhana
Pathway
skh00541
Biosynthesis of various nucleotide sugars
skh01100
Metabolic pathways
skh01250
Biosynthesis of nucleotide sugars
Module
skh_M01008
CMP-8eLeg5Ac7Ac biosynthesis, UDP-GlcNAc => CMP-8eLeg5Ac7Ac
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
STH12_02028 (pglF_2)
Enzymes [BR:
skh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
STH12_02028 (pglF_2)
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
STH12_02028 (pglF_2)
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
3Beta_HSD
Epimerase
DXP_reductoisom
GDP_Man_Dehyd
Sacchrp_dh_NADP
adh_short
Shikimate_DH
DUF2459
Methyltransf_12
TrkA_N
LUD_dom
Motif
Other DBs
NCBI-ProteinID:
AZQ11116
UniProt:
A0ABM7DNS6
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Position
complement(2300677..2301867)
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AA seq
396 aa
AA seq
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MSNILSLIGREKELFSEDIRLNGEDLQRIVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKL
HVVDISENNMVELVRDIRSSFGYIEGDFQTFALDIGSFEYDAFIKADGQYDYVLNLSALK
HVRSEKDPFTLMRMIDVNVFNTEKTIQQSIDAGVKKYFCVSTDKAANPVNMMGASKRIME
MFLMRKSEQIAISTARFANVAFSDGSLLHGFNQRIQKGQPIVAPNDIKRYFVTPQESGEL
CLMSCIFGENRDIFFPKLSEALHLITFADIAVKFLKQRGYEPHFCANEDDARELAKTLPA
EGKWPCLFTASDTTGEKDFEEFFTDREVLDMERFENLGIIKNELLYQRELLTVFEEKIAL
MKADKSWTKEQIVELFFTMIPDFGHKETGKYLDSKM
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatatattgtcattgattggacgtgaaaaagagttattttctgaagatatacgc
cttaatggtgaagatttacagcgtattgtatcgcaatctagattcctcgtattaggtggt
gctggttcaatcggccaagccgttaccaaagaaatctttaaacgcaatccacaaaagctc
catgtggtggacattagcgaaaacaatatggttgagttagtgcgagatattcgtagttca
tttggctatattgagggtgatttccaaacatttgctttagatataggctcgttcgaatac
gacgccttcataaaggctgatggtcaatatgattacgtattgaacttgtcagcccttaag
catgtccgcagcgagaaagacccttttaccttaatgcgcatgattgatgtcaacgtgttc
aacacagagaaaacaatacagcagtcgattgatgctggtgttaaaaaatacttttgcgtt
tctactgacaaagctgctaatccagtcaatatgatgggtgcatccaaacgcattatggaa
atgtttttaatgcgtaaaagcgagcaaattgcaatctcaactgcacgttttgctaatgtg
gccttttccgatggttcgttgctgcacggttttaaccagcgcattcaaaaaggccagcca
atagtcgcaccaaatgacatcaaacgatattttgtcactccacaggagtcgggcgaactt
tgtttgatgtcttgcatttttggcgagaatagagacatttttttcccaaaactgagtgaa
gctctgcatttaatcacatttgctgatattgctgtgaaattcctcaagcagcgaggttac
gaaccacacttttgtgctaatgaagatgatgcccgagagttagcgaagaccctccctgca
gaaggtaaatggccttgtctttttaccgcaagtgatacgactggtgaaaaagattttgaa
gagtttttcacagatagggaagtgcttgatatggagcgttttgaaaatctcgggattatt
aaaaatgaacttctttatcagcgagagttgttgactgtgtttgaagaaaaaattgctctg
atgaaagctgataagtcttggactaaagaacagatcgtagaactcttctttaccatgatc
cctgactttggccataaagaaacgggtaaatacctcgacagcaagatgtaa
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