Spirosoma linguale: Slin_0820
Help
Entry
Slin_0820 CDS
T01156
Name
(GenBank) NodT family RND efflux system outer membrane lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sli
Spirosoma linguale
Pathway
sli01501
beta-Lactam resistance
sli02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Slin_0820
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Slin_0820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_0820
01504 Antimicrobial resistance genes [BR:
sli01504
]
Slin_0820
Transporters [BR:
sli02000
]
Other transporters
Pores ion channels [TC:
1
]
Slin_0820
Antimicrobial resistance genes [BR:
sli01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Slin_0820
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Slin_0820
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Slin_0820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-GeneID:
8724551
NCBI-ProteinID:
ADB36882
UniProt:
D2QHZ4
LinkDB
All DBs
Position
complement(994448..995875)
Genome browser
AA seq
475 aa
AA seq
DB search
MSRLYSSSSFFVISILALALLVSGCKVGQHYQRPTTQMPEQFRGRSQSDTTSVALIPWRQ
FFRDTELQNLIGTALTNNFDLQVALKRIEENQAYVRQTRYALLPAVNAQIAASTVTPSRN
SLNGLSLENFIGTRHLEDFSTNLSLSWEIDIWGRIRRQNEATLAQFLQTEEAAKAVRTNL
VASVATGYFNVLLLDAQLDVAKRNVALGDSIVRLIRFQKKSGDVTELAVQQAEAQRQAAD
LLRSQLEQALVIEQNGIRHLLGDWPGAIARSSRLTTYPVADTLLTGVPAQLLANRPDVRM
SELGLVAANARAGVAEASLYPALTITGSGGLNSFRAVNWFALPTSLFYNLAAGLVQPVFQ
RRQLQTQLEVSQIQRESALIQFRQSLTTAVTDVSNALVRNEKLQEQERIATKRAQTVQGA
ITNAKLLFKSGMATYLEVITAQSNALQAELTLADIKRQRLGAMVDVYRSLGGGWR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgactctattcttcgtcctctttcttcgtaatcagtatactcgcgcttgccctg
cttgtctcaggttgtaaagttggccaacattaccagcggccaacaacgcaaatgccggag
cagtttagggggcgtagccaatccgacaccaccagcgtcgcgctgattccctggcgacag
ttctttcgggataccgagttgcagaatctgatcggaacggcgctgaccaacaacttcgat
ttgcaggtagcccttaaacggatcgaggaaaaccaggcctatgttcgccagacgcggtac
gcgctgttgcccgccgttaacgcgcaaatcgcggcctcaacggtgacgccatcgcgaaac
agcctgaatggcctgagtctggaaaattttatcggcacccgacatctggaagatttctcg
actaacctttcattatcctgggaaatagacatctggggacgaatccggcggcagaacgaa
gccaccctagcccaatttctgcaaaccgaagaagccgccaaagcggtacgtaccaatctg
gtagcttctgtcgcaacgggttattttaacgtcttgctactggatgctcaactggacgta
gcgaagcggaacgtagccctgggcgattccatcgtgcggctgatccggtttcagaagaag
tcgggcgacgtaacggaactagccgtacaacaggccgaagcccagcggcaagcggccgac
ctgctacggtcgcagttggaacaggcactggtcatcgaacaaaacggcattcggcactta
ctgggggactggccgggcgctattgcccggagcagtcggctcaccacctatcccgtcgct
gatacgctgctgacgggcgtaccggcacaattgctcgccaatcggcccgatgtgcggatg
agcgagttgggactggtagcggccaatgcccgggctggcgttgccgaagccagtttgtac
ccagccctgaccattacggggagcggtggcttgaattcctttcgggccgtaaactggttt
gcgctgcctacctcactgttctacaatctggcagcgggtctggtgcagcctgtttttcaa
cgccgtcagctccagacgcagctggaagtgagccagattcagcgggagtcggctctgata
cagtttcgccagagcctgacgactgccgttaccgacgtgtcgaatgcgttggttcggaac
gagaagttgcaggagcaggaacgaattgctacaaaacgtgcccaaacggtacagggagcc
attaccaatgctaaacttctgtttaagagcggaatggccacctatctagaggtgatcacg
gcgcaaagtaacgcccttcaggcggaactcaccttagccgacatcaaacggcaacgcctg
ggagcgatggtcgacgtctatcggtcgctggggggcggctggcggtag
DBGET
integrated database retrieval system
