Spirosoma linguale: Slin_4412
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Entry
Slin_4412 CDS
T01156
Name
(GenBank) outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
sli
Spirosoma linguale
Pathway
sli01501
beta-Lactam resistance
sli01503
Cationic antimicrobial peptide (CAMP) resistance
sli02020
Two-component system
sli03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Slin_4412
09132 Signal transduction
02020 Two-component system
Slin_4412
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Slin_4412
01503 Cationic antimicrobial peptide (CAMP) resistance
Slin_4412
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_4412
02044 Secretion system [BR:
sli02044
]
Slin_4412
01504 Antimicrobial resistance genes [BR:
sli01504
]
Slin_4412
Transporters [BR:
sli02000
]
Other transporters
Pores ion channels [TC:
1
]
Slin_4412
Secretion system [BR:
sli02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Slin_4412
RTX toxin transporter
Slin_4412
Multiple protein transporter
Slin_4412
RaxAB-RaxC type I secretion system protein
Slin_4412
Antimicrobial resistance genes [BR:
sli01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Slin_4412
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Slin_4412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Lectin_N
ACBP4_C
SOAR
Motif
Other DBs
NCBI-GeneID:
8728172
NCBI-ProteinID:
ADB40393
UniProt:
D2QLV3
LinkDB
All DBs
Position
5348289..5349623
Genome browser
AA seq
444 aa
AA seq
DB search
MTYRLYIVATILLTAGAGRAQTPSVQLPDDLRALVQQANTNYPSLKQQQQLIQAGDLRAD
IARTALRPNVNGTASYQYLTPVAKATLPVDGVNRTIQFQPNHNVNASLGVGQTIYDWGRT
NAAVQQAADNVQVLRRGLEITQQTLAYQVAAAYYGVGFLQRSLSVQDSVIQTAGANVRLL
TTRLQNGDALEYDVLTQQVRVKTAQNRKIEIQNQLERQLAFLTYLTGNPNPDVSRAMSQF
NLEASGGRVTTQPFLMADGPNPLASNKDVQLAQDRVRQAETDILVSDLSGRPNLSFSGSA
GYRNGYLPEINTPRFNIAAGVSLTVPIYAGKRYQLQNQAAQLNLNASRYAVENANAQVRQ
TIAQLNADIRSNQSRLTNLETQVLQAQKALQIANARLRNGVITNVELQSAETGVEEAELG
RLNFQYQLMLNQLELKRLLGEPLL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgacttacagactttacatagtagcgactatactactcaccgccggggcgggtcgggca
caaaccccgtcggtgcaactacccgacgaccttcgggcgctggttcagcaggcaaacacc
aactaccccagcctgaagcaacagcagcagcttattcaggcgggtgacctacgggcagat
attgcccgtacggcgcttcggcccaacgtgaacgggacagcgtcttatcaataccttacg
cccgttgccaaagctacgctaccggtagacggtgtgaaccggactattcagtttcagccc
aatcacaatgtaaatgcctcacttggtgttggacaaaccatttacgactggggccgtacc
aacgcagcggttcagcaggcggccgataacgtgcaggtgctccggcggggtctcgaaatt
acacagcaaacgctggcctatcaggtcgctgcggcttactatggcgtcgggtttctgcaa
cggagtttgtcggtacaggattcagttattcagaccgccggtgccaatgtgcgacttttg
acaacacgtctgcaaaacggcgatgcgctggaatatgatgtactaacccagcaggtacgg
gtaaaaacggcgcaaaaccggaaaattgaaattcagaatcagttggagcgtcaactggct
tttctgacttacctgaccggcaatcccaatccggatgtaagccgggcgatgagccagttc
aacctggaagcgtcgggtggtcgtgtaacaacgcaaccgtttctaatggccgatggaccg
aacccgctggcaagcaataaagatgtgcaactggcgcaggatcgggttcggcaggccgaa
acggacattctggtatcggacttatccggccgtccgaacctgagtttttcgggttcggca
ggctaccgcaacgggtatctgccagagatcaatacccctcgcttcaacatagccgcaggc
gtgtcgctaaccgttcctatttatgccggtaagcggtaccaactgcaaaaccaggcggct
caactcaacctgaacgccagccgctacgccgtcgagaacgctaatgctcaagtgaggcag
actattgcgcaactcaacgccgacattcgcagcaaccaatcccgccttaccaacctcgaa
acgcaggtgttacaggcacaaaaagcgcttcagattgccaacgcccggctgcgaaatggg
gtcattaccaatgttgagttacagagtgccgaaacgggtgtggaagaagccgaactaggt
cgattaaattttcaatatcagctaatgctcaatcagcttgaattaaaacgattgctgggt
gaaccgttgctatag
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