Sodalis ligni: GTU79_05860
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Entry
GTU79_05860 CDS
T08321
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K22015
formate dehydrogenase (hydrogenase) [EC:
1.17.98.4
1.17.98.-]
Organism
slig
Sodalis ligni
Pathway
slig00680
Methane metabolism
slig00720
Other carbon fixation pathways
slig01100
Metabolic pathways
slig01120
Microbial metabolism in diverse environments
slig01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
GTU79_05860 (fdhF)
00680 Methane metabolism
GTU79_05860 (fdhF)
Enzymes [BR:
slig01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
GTU79_05860 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Motif
Other DBs
NCBI-ProteinID:
QWA12278
LinkDB
All DBs
Position
complement(1255529..1257700)
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AA seq
723 aa
AA seq
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MHKALTVCPYCGSGCKINLLVENGNVVGAEAANGVTNQGQLCLKGYYGWDFLNDTRLLTP
RLRSPMIRREKGGNLEEVSWDEAIEFASSRLRHIKEKYGPKAIMQTGSSRGTGNETNYVM
QKFARAVIGNNNVDCCARVCHGPSVSGLQVTLGNGAMSNSICEIEDTKCLLVFGYNAADS
HPIVARRILKAKQKGAKIIVCDPRRIETARLADLWLPLKNGSNMALVNAFANVLINENLY
DADYVARNTEGFDEYKSIVAKYTPEYVEEITGLPAQQIREAIRMYAAAPTATILWGMGVT
QWGQAVDVVKGLSGLALMTGNLGKPNVGVGPVRGQNNVQGACDMGALPNMFPGYQPVTDP
AAREKFARAWGVESLPAEPGFTLTDVPHKILSGEIKANYVMGEDPLQTEPDLSVMRQAFS
ELELLIVQDIFMTKTASVADVILPSTSWGEHEGVYTAADRGFQHFEKAVEPKFNVKTDWQ
IISLMATALGYPMFYNNTKEIWDELRGLCPLYVGATYEKLAGFGYVPWPCTEESSPGTPW
LYEGNKFDRPGGKGLLFAAEWRPPLDQVDDAFPLVLCTVREVGHYSCRSMTGNCTALATL
ADEPGYVQINPKDAEKLGIRDQQLVWVSSRRGKVITRAAVSERINLGAVYMTYQWWIGAC
NELTIDHLDPISKTPEYKYCAVKLEMIDDQRWAENYVQTEYSHLKARLRNAVDDAITPAI
TTA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcataaagcacttaccgtatgtccgtactgcggctccggctgcaaaatcaatttgttg
gttgaaaacgggaacgtcgtcggcgccgaggcggccaatggcgtcaccaatcagggccag
ctttgcctgaagggatattacggctgggattttctcaatgatacccgcctgctgacgcca
cggctgcgcagcccgatgatccgccgggaaaaaggcggtaatctggaagaggtatcctgg
gacgaggccatcgaattcgccagctctcggctgcgccatattaaagagaaatatggcccc
aaggccattatgcaaaccggttcgtcccgcggcaccggtaatgaaaccaattatgtcatg
cagaagttcgcccgtgccgtcataggcaacaacaatgtcgactgctgcgcccgtgtctgc
cacggcccgtcggtgtccggtttacaggtgacgcttggcaacggcgccatgagcaattcg
atttgtgaaatcgaagataccaaatgcctgctggtgttcggctacaatgccgccgattcg
catcccatcgtggcgcggcgcatcctcaaggccaaacagaaaggcgctaaaatcattgtc
tgcgacccgcggcgcattgaaaccgcccgcctggccgacctgtggctgccgctgaaaaat
ggttccaatatggcgctggtgaatgcctttgccaacgtgctgattaatgaaaatctgtac
gatgcggattacgtggcgcgcaataccgaaggctttgacgaatacaaatccatcgtcgcc
aagtacacccccgaatatgtggaagagattaccggcctgccggcgcagcagatccgcgaa
gccatccgcatgtatgccgccgcgcccaccgccaccattctgtggggcatgggcgtcacc
cagtggggccaggcggtggatgtggtgaagggactgtccggactggcgctgatgaccggc
aacctgggtaaacccaatgtgggcgtcggcccggtacgcggccagaataacgtgcagggc
gcctgcgatatgggcgcgctgccgaatatgttccccggctatcagccggtgaccgacccg
gcggcccgggaaaaattcgcccgcgcctggggtgttgaatccctgcccgccgagcccggg
tttaccctgaccgatgtaccgcacaaaatccttagcggcgaaatcaaagccaactatgtc
atgggtgaagatccgttgcagaccgaaccggatttgtcggtgatgcgccaggcgttcagc
gagctggaactgctgattgtgcaggacatctttatgaccaaaaccgcgtcggtggcggat
gtgatattgccgtccacctcctggggcgagcacgaaggggtctataccgccgccgaccgc
ggcttccaacacttcgaaaaagcggtggaaccgaagttcaacgtcaagaccgactggcag
atcatcagcctgatggccaccgccctgggttatccgatgttttacaataataccaaggag
atctgggacgaactgcgggggctgtgcccgttatacgtcggcgccacctatgagaaactg
gccggattcggttatgttccctggccctgtacggaagaaagcagtccgggcacgccgtgg
ctgtatgaaggcaataaattcgaccgtcctggcggtaaaggcctgctgttcgccgccgaa
tggcggccgccgctggatcaggtggatgatgcgttcccgctggtgctctgcaccgttcgg
gaggtgggccattactcttgccgttctatgaccggtaactgtacggcgctggccaccctg
gcggatgagccgggttatgtgcagattaatcctaaggacgccgagaagctgggcattcgc
gatcagcaattggtgtgggtctcttcccgccgcggtaaggtcattacccgtgcggcggtg
agcgagcgcattaaccttggggcggtctatatgacctaccaatggtggattggcgcctgt
aatgagctgaccattgatcatctggatcctatttccaagacgccggaatataagtattgc
gcggtgaaattggaaatgattgacgatcagcgctgggcggaaaactatgtgcaaaccgaa
tacagccatttgaaggcgcggctgcgtaatgcggtggatgacgctatcactcctgccatc
actactgcttag
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