Sodalis ligni: GTU79_19975
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Entry
GTU79_19975 CDS
T08321
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
slig
Sodalis ligni
Pathway
slig01501
beta-Lactam resistance
slig02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GTU79_19975
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GTU79_19975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_19975
01504 Antimicrobial resistance genes [BR:
slig01504
]
GTU79_19975
Transporters [BR:
slig02000
]
Other transporters
Pores ion channels [TC:
1
]
GTU79_19975
Antimicrobial resistance genes [BR:
slig01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GTU79_19975
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
GTU79_19975
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
GTU79_19975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
FliJ
Motif
Other DBs
NCBI-ProteinID:
QWA09603
LinkDB
All DBs
Position
complement(4275440..4276903)
Genome browser
AA seq
487 aa
AA seq
DB search
MPLRIRLLPLLCSFVLAGCALPNGLHTEGRTLDVSTLQSDRTLSAIPHSTAAWPAADWWN
SLGDPQLAILVQQALQSSPDMQVADARARQASAAVMSAQADRMPTLDASGGITRERLSEV
QDPQGKGKEYFTERDLSAQFNYTFDLWGGQRAAWEAAVGRANASEVDRQSARLTLSADVA
RAYNTLGQAYVMEDLARQDLARTHTMLDLASKRYTAGLDSKFQYQQTESLEASAESTLTD
AQQQVRAAGIRLAVLLGQGPDRAMNIPRPHLIAPAAVTLPARLPAELLGRRPDLVAARWR
VEAATKDIKVSRTAFYPNLNLTAAAGAQSLLGDAFFGAPSRYFSVGPAISLPIFVGGRLR
ANLAGSNADYDLAVAQYNQSLVNALGDIGDTITRLSSLAVQIQQQQRACDIANDSWKNAM
ERYSAGVGNYLDALSVQQQLIQAQRQLASLNAERTDTAILLMQALGGGFNSSVPSTAAQT
VAVNQAH
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgcgcattcgtttattaccgctgctctgttcattcgttctggcggggtgtgct
ttgcctaatggtttacataccgaaggccgtacgctggacgtctcgacgttacaaagcgat
cgtaccttgtcggcgatcccgcactccaccgcggcctggcctgcggcggactggtggaac
agcctcggcgacccgcagcttgccatcctggttcagcaggcgttgcaatccagccccgat
atgcaggtggccgatgcccgcgcccgccaggccagcgccgcggtcatgtcggcgcaggcc
gaccgcatgccgaccctggacgccagcggcggcattacccgtgagcggctgtccgaggtg
caagacccgcagggtaaagggaaagagtatttcaccgagcgggatctgtcggcgcagttc
aattatacctttgatctgtggggcggccagcgtgccgcctgggaagccgccgtcggccgc
gccaacgccagcgaggtggacagacagtccgcgcgccttaccctctccgccgatgtcgcc
cgcgcctacaataccctcggccaggcctatgtgatggaagatttggcgagacaggatctt
gcgcgtacccataccatgctggatctggcgtccaaacggtataccgccggactggacagt
aaattccaatatcagcaaaccgagagcctggaagcctcggcggaatccaccttgaccgac
gcccagcagcaggtgcgcgcggccggtatccgcctggcggtgttgcttggacagggaccg
gaccgggcaatgaatataccccgtccgcatctgattgctccggcggcggtaaccctgccg
gcccggcttccggcggaactgttaggccgccggcccgatctggtggcggcccgctggcgg
gtagaagcggcaaccaaagacatcaaggtcagccgtaccgccttctatcccaatcttaat
ctgaccgcggcggcgggtgcccaatcgctgctgggagatgccttcttcggcgccccaagc
cgctatttcagcgtcgggccggccatatccctgcctatctttgtcggcggtcgcctgcgg
gcgaacctggccggcagcaacgccgattacgatctggcggtggcgcaatacaaccagtcg
ctggtgaatgcgctgggggacatcggcgacaccattacccgcctgagttcgttagcggtt
cagattcaacagcagcagcgcgcctgcgatatcgccaatgactcatggaaaaacgctatg
gagcgctatagcgccggggtcggcaattatctcgatgcgttgagcgtgcagcaacagctc
atccaggcccagcgtcaactggccagtttgaatgccgaacgtaccgataccgctatcctg
ttgatgcaggcgctgggtggtggtttcaactcttccgttccatcgaccgccgcgcaaacc
gtggccgtaaatcaagcacactga
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