Shewanella marisflavi: CFF01_02605
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Entry
CFF01_02605 CDS
T05400
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
smav
Shewanella marisflavi
Pathway
smav01501
beta-Lactam resistance
smav01503
Cationic antimicrobial peptide (CAMP) resistance
smav02020
Two-component system
smav03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CFF01_02605
09132 Signal transduction
02020 Two-component system
CFF01_02605
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CFF01_02605
01503 Cationic antimicrobial peptide (CAMP) resistance
CFF01_02605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smav02000
]
CFF01_02605
02044 Secretion system [BR:
smav02044
]
CFF01_02605
01504 Antimicrobial resistance genes [BR:
smav01504
]
CFF01_02605
Transporters [BR:
smav02000
]
Other transporters
Pores ion channels [TC:
1
]
CFF01_02605
Secretion system [BR:
smav02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CFF01_02605
RTX toxin transporter
CFF01_02605
Multiple protein transporter
CFF01_02605
RaxAB-RaxC type I secretion system protein
CFF01_02605
Antimicrobial resistance genes [BR:
smav01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
CFF01_02605
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
CFF01_02605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DNA_repr_REX1B
Motif
Other DBs
NCBI-ProteinID:
ASJ98551
UniProt:
A0AAC9U5L0
LinkDB
All DBs
Position
complement(579080..580405)
Genome browser
AA seq
441 aa
AA seq
DB search
MKFKIRTLCAALTLAATTTAVQADDLLQIYQQALTNDPVALQAQAQRDRLYEQIEENRAP
LLPTISANIGYGKSWSNVDDDMYNSGLDAGVSLRQVIYDHSAWVGLDLAELAASQADAAY
ASTLQSLIIRVTSAYFDVLAAKDNYEFKGAEKRAIERQLEQTKQRFAVGLTAITDVHEAQ
AQYDLARASEILAENQLINSYEALREITGIDHKSIDILDTTRFTAVPPTPGNPSEWLKMA
ETNSVDLLTTRIGKDIAQQTISLFKAGHMPSLSLNAGYTTNLDQQNQTGNLNDYDNANVG
LTLSVPIFEGFKVSSKVNQAQYQYVEASEKMEQTFRKVVKDVRNNFNNVGASISSIRAYE
QSVVSSESALKATQAGFEVGTRTIVDVLNRTRDLYDSKRQLSNARYGYINSILALKQATG
TLSEDDVIAINNGLKAPEVSQ
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaagatccgcaccttatgtgcagcgttgacgcttgcagcaacgactactgcc
gtgcaggccgacgatctcctgcagatataccagcaggccctaaccaatgatcctgttgcg
ctgcaggcacaagcacagcgtgaccgtctttacgagcagatcgaagaaaaccgtgctcca
ctcctaccaactatcagtgccaacattggctatggaaaaagttggagcaacgttgatgat
gacatgtacaacagcggcctagatgcaggtgtctcgctgagacaggtcatctacgatcat
agcgcctgggtcggactcgatcttgcggagcttgccgcctctcaagcagacgcggcctat
gcctcgacacttcagtccctgatcattcgtgtcaccagtgcttatttcgatgtcttagcc
gcgaaagacaactatgaatttaaaggcgcagaaaaacgtgctatcgagcgtcagcttgaa
caaactaaacaacgttttgctgtgggccttaccgccattacagacgtacatgaagcccaa
gcccaatatgacttggctcgtgcatctgaaattctggcagaaaaccagctgatcaacagc
tacgaagccctgcgagaaatcaccggcatagaccacaagtctatcgatatcttagatacc
acacgctttaccgcggtaccaccaaccccaggtaacccaagcgagtggctaaagatggcc
gaaaccaatagtgtagatctgttaacgacacgtatcggtaaagatatcgctcagcaaacc
atctcgctttttaaggccggtcatatgccgtcattaagccttaatgcgggttacaccacc
aatctggatcagcagaatcagacgggtaacttgaacgattatgacaatgccaatgtcggt
ttgacccttagcgtgcctatctttgaaggctttaaagtcagttccaaagtcaatcaggct
caataccaatacgtagaagccagtgaaaaaatggagcagactttccgcaaggtagtcaaa
gatgtgcgtaacaacttcaataacgttggcgcttctatcagctcaatccgcgcctatgag
caatctgtggtctcttcagaaagtgcgctgaaagccacccaagccggttttgaagtcggt
acccgtaccattgttgacgtgctcaaccgtacgcgtgacctatacgactctaagcgtcag
ctctctaatgcccgttacggttacatcaactctatcctagcgttgaaacaggccacaggc
acattgagcgaagacgatgtcatcgccatcaataacggcctaaaggcaccagaagtcagt
cagtaa
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