Silurus meridionalis (southern catfish): 124380054
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Entry
124380054 CDS
T08004
Symbol
f2
Name
(RefSeq) prothrombin
KO
K01313
coagulation factor II (thrombin) [EC:
3.4.21.5
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124380054 (f2)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
124380054 (f2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124380054 (f2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124380054 (f2)
00536 Glycosaminoglycan binding proteins [BR:
smeo00536
]
124380054 (f2)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.5 thrombin
124380054 (f2)
Peptidases and inhibitors [BR:
smeo01002
]
Serine peptidases
Family S1: chymotrypsin family
124380054 (f2)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
124380054 (f2)
Glycosaminoglycan binding proteins [BR:
smeo00536
]
Heparan sulfate / Heparin
Coagulation and fibrinolysis
124380054 (f2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
Kringle
Gla
Thrombin_light
DUF1986
UPAR_LY6
Motif
Other DBs
NCBI-GeneID:
124380054
NCBI-ProteinID:
XP_046696692
LinkDB
All DBs
Position
26:complement(512053..519963)
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AA seq
619 aa
AA seq
DB search
MGAVPAPLLVTLLLSLVFQLTFCYDVFIDEKTASQVIRAKRANSPFEELKSGNLERECLE
EICDHEEAREVFEDNSKTTAFWDTYLACSGNLIQRNVDTVRVIRTCLDHKGICYVNNGEY
YGGKVNVTISGKPCQYWRSNFPHRITELNTTTLNLPENLCRNPDKRPGGPWCFTSDPTVR
TEKCAVPKCGEKLLPTIPPVQVKDVAERYRQTNCLQGYGESYTGTLSVTLHGHNCLNWNL
PKVKALSASKDFSQDVVLLKNYCRNPDGDLEGPWCYVKDRGNITMDYCDLELCDAPLDGV
IEEDGVRQRTVGAKKDTFFNPDSFGQGELECGERPMFEKVNKDDATESELIKSYEKRIVQ
GETAEVGSAPWQVMLYKRSPQELLCGASLISDQWILTAAHCILYPPWGKNFTIDDILVRL
GKHERAKYERGIEKIVAIDEIIVHPKYNWKENLNRDIALLHMKKPVTFTSVIHPICLPTK
NTVNTLMSVGYKGRVTGWGNLKEAWTSNPQNLPPKLQQIHLPIVDQDICRKSTAIRITDN
MFCAGYSPEDNKRGDSCEGDSGGPFVMKNPDDKRWYQIGIVSWGEGCDRDGKYGFYTHLF
RMRRWMRKVIDKSEASDDD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagtaccagcgcctctccttgtcacgcttctcctcagcctggtgtttcagctc
acattctgctacgatgtttttatcgatgagaagacggcgtctcaggtgatccgagcaaag
agagcaaactcaccttttgaagagttaaagagtgggaatctggagagggaatgtctggag
gagatctgtgaccatgaggaggctcgagaggtgttcgaggacaacagtaaaacgactgca
ttttgggacacatacttggcatgttctggcaacttgatacagcggaatgtggatactgtt
cgagtaatccggacttgtttagatcataagggtatctgctacgttaataacggtgaatat
tacggaggtaaagtgaatgtgactatctcagggaagccatgccagtactggagaagcaac
ttccctcaccgaatcactgagttgaatacaacaaccctaaacctgcctgagaatttgtgc
agaaatccagataaaagacctggtgggccgtggtgtttcaccagtgaccccactgtcagg
acagagaaatgtgcagtgccaaaatgtggtgagaagttgctgcccactattccccctgtc
caagtaaaggatgtagctgagcgctaccgtcaaaccaactgtttacagggctatggcgag
agctacactggaacgctctcagtgacgctacacggccacaactgcctgaactggaacctt
cccaaagtgaaagctctgagtgcaagtaaggatttcagccaggatgttgttctattgaag
aactactgcaggaacccggatggagatctggagggcccatggtgctacgtgaaggacagg
ggaaacatcaccatggactactgtgatcttgagctctgtgatgctcctctggatggggtg
atcgaggaagatggggttcgtcaaagaactgttggagcaaaaaaggacacattctttaac
cctgatagctttgggcagggagaattggaatgtggcgagcgaccgatgtttgagaaagtc
aacaaagacgacgcaacggaatcagagctcatcaaatcctacgagaaaagaatcgtacaa
ggagagacggctgaagtcggaagtgcgccatggcaggtgatgctgtataaacgaagtcct
caggagctgctgtgtggagccagtctgatcagtgaccagtggatcctcactgctgctcac
tgtatcctttaccctccatggggcaagaacttcaccatcgatgacattcttgtgcgactc
ggaaaacacgagcgggctaagtatgagagaggcatagagaagatcgtggctattgatgaa
atcatcgtccatcctaaatataactggaaggagaatctgaaccgagacatcgctctgctg
cacatgaagaaacccgtcaccttcaccagcgtcatccaccccatctgccttcccaccaag
aacaccgtaaacactttgatgtcagtcggatataagggtcgtgtaaccggctggggaaac
ctgaaagaagcatggacgtctaaccctcagaaccttccaccgaaactgcagcagattcac
ctgcccatcgtggaccaagatatctgtcgtaaatccaccgccattcgcatcacagacaac
atgttctgtgcaggttacagtcctgaggataataaaagaggtgattcgtgtgaaggagac
agcggtggaccttttgtgatgaagaacccagatgataaacgctggtaccagatcggcatc
gtgtcctggggtgaaggctgcgatcgggacggcaaatacgggttctacactcatttgttc
cgtatgcgccgctggatgaggaaagtcatagataaatcagaggcttctgatgatgactga
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