Silurus meridionalis (southern catfish): 124385347
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Entry
124385347 CDS
T08004
Name
(RefSeq) complement C1r-A subcomponent-like isoform X1
KO
K01330
complement component 1, r subcomponent [EC:
3.4.21.41
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124385347
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124385347
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124385347
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.41 complement subcomponent C_overbar_1r_
124385347
Peptidases and inhibitors [BR:
smeo01002
]
Serine peptidases
Family S1: chymotrypsin family
124385347
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Phagocytosis
Opsonins
124385347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
CUB
Sushi
DUF1986
Melibiase_2
Motif
Other DBs
NCBI-GeneID:
124385347
NCBI-ProteinID:
XP_046704604
LinkDB
All DBs
Position
4:15919383..15943391
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AA seq
686 aa
AA seq
DB search
MARLQQILSVLCICVSVCVCKVSMRGQVQSPLYPKPYPTSVNQQWDLEVPHGYQFQFTFY
HLDIEPSFNCVNDSLMVLHGKKLLGKFCGQNSTYPHHPGNNPILFKSNHLQLVFVTDLSN
TETHFGFSAVYQAVVDCNRGVFTEPKGVLLSPGYPNAAPLGVNCLYIISVKPGFQISLNF
SDDFRIMKVHAEEPSCSIHWLELSVPGKTSKKLCGDNSPGVIHTGSHTVYLGFHTDPWMK
GGGFRLHYTTQRVECKIEGGIPNGRVTLGSCDTEYKLYTVSNTGETPKNLSGVEDCKIEG
GICKNKHTHYLPKYCYRDYIEVHCDTGYKLTMGENEIKSYKSLCQENGTWHLPLPECKII
DCGEPKSLLNGGFKYLANSKNEYMSVIQYHCNEPFYAFKDTNKINFTCDADRKWRGYDDD
IIPRCFPVCGRPVVDIAGGHGRVLGGQKAVDNSFPWQVYLLVEGGGRGGAIVIGEKWLLT
AAHMFNKDNLSKDELKTFVGSNKVSDYFESNTSFKALPIESFHIHPGYKRPDYNNDIALI
KLASSLTFNAGVMPVCLPAQDSGLQNSGWVSGFGITERYRTANHLRYITLPIVDQEVCCF
SFEEVKKTGGNVSNLTENMFCAGLPEGGKDTCQGDAGSGFVTKKNDVFYVAGIVSWGVEC
GRPGRYGVYTRVARYTNWIQKIMEEP
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggctagattacagcaaatactgagtgtgttgtgtatatgtgtgagtgtttgtgtgtgt
aaggtatcgatgcgtggtcaggttcagtctcctttgtatccaaagccttaccccactagt
gttaatcagcagtgggatctggaggttccacatggctatcaatttcagttcactttttat
cacctggacatagaaccatcatttaactgtgtcaacgactctctcatggttctgcatggt
aagaaacttttgggaaagttctgtggccaaaattccacatatccacatcatcctggcaac
aatcctattttgtttaaaagcaaccatctccagctggtgtttgtgactgatctatcaaac
acagaaacacattttgggttctccgccgtttaccaggcagttgtggactgcaatagagga
gtttttacagaacccaagggagttctcttaagtcctggatacccaaatgctgctcctctt
ggagtgaactgcttgtacattatatctgttaagcccggttttcagataagtctaaacttc
agtgatgacttccgcattatgaaggttcatgcagaggaaccctcctgctcaatccactgg
ctagagttgtctgtcccaggtaaaacttcaaagaagctttgtggagataatagccctgga
gtcattcacactggttcacacactgtatatcttggatttcacaccgatccatggatgaag
ggtggaggattcagacttcactacacaacccagagagtggagtgtaaaattgaaggtgga
atcccaaatggccgagtcactctaggcagctgtgacactgaatacaaactttatacggtg
tcaaacactggtgaaactccaaagaatctttctggagtagaagactgtaaaattgaagga
ggaatctgcaaaaataaacacactcactatttgccaaaatattgctacagagattacatt
gaagttcactgtgacaccggatacaaactcacaatgggagaaaatgaaattaaaagttat
aaatcgttgtgtcaggagaacgggacgtggcatttaccattacctgagtgcaaaattatt
gattgtggagaaccaaagagtttactgaacggtggatttaaatatttagccaattctaaa
aatgagtacatgtctgtcattcagtatcactgcaacgaacccttctatgctttcaaagac
acaaacaaaataaatttcacctgtgatgctgatcgaaaatggagaggatatgacgatgac
atcataccacgttgtttcccagtgtgtgggcgtcctgtagtggatattgctggtggtcat
ggtcgggttttaggaggacaaaaagcagtagacaattcatttccctggcaggtgtatcta
ctggtggaaggtggaggaagaggaggagcgattgtgattggggagaaatggctcctcact
gccgctcacatgttcaacaaagacaatttgtctaaagatgaattaaagacatttgttgga
agcaacaaagtgagcgactattttgaaagcaacacatcgtttaaagcacttcctattgaa
tcatttcacatccatccaggatataaaaggccagattacaataatgatattgcattaatt
aagctggcatcatccctcacctttaatgcaggtgtaatgccagtgtgtcttcctgcacag
gactctgggcttcaaaattctggatgggtctctggatttggaataacagagagataccgc
actgctaatcatctcaggtacatcactcttcccatagtggatcaagaagtgtgttgtttt
tcttttgaggaggtgaaaaagacaggaggtaatgtgtccaatctgacggagaacatgttc
tgtgctggacttcctgaaggagggaaggacacgtgtcaaggagatgctggctctggtttt
gtcacgaaaaagaatgatgtgttttatgtagcaggaattgttagctggggagtcgaatgt
ggaagaccaggaagatacggagtatacacacgtgtagctcgatacacaaactggatccag
aaaataatggaagaaccctaa
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