Silurus meridionalis (southern catfish): 124386509
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Entry
124386509 CDS
T08004
Symbol
casp3b
Name
(RefSeq) caspase-3b
KO
K02187
caspase 3 [EC:
3.4.22.56
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04115
p53 signaling pathway
smeo04148
Efferocytosis
smeo04210
Apoptosis
smeo04623
Cytosolic DNA-sensing pathway
smeo05132
Salmonella infection
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124386509 (casp3b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124386509 (casp3b)
09143 Cell growth and death
04210 Apoptosis
124386509 (casp3b)
04115 p53 signaling pathway
124386509 (casp3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
124386509 (casp3b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124386509 (casp3b)
09171 Infectious disease: bacterial
05132 Salmonella infection
124386509 (casp3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124386509 (casp3b)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.56 caspase-3
124386509 (casp3b)
Peptidases and inhibitors [BR:
smeo01002
]
Cysteine peptidases
Family C14: caspase family
124386509 (casp3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C14
HisK_sensor
RusA
MUCL1
WH_Egal
DUF6642
Motif
Other DBs
NCBI-GeneID:
124386509
NCBI-ProteinID:
XP_046706353
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All DBs
Position
5:complement(17381937..17388321)
Genome browser
AA seq
285 aa
AA seq
DB search
MSGVKNSGKADGGDHVDARKAEATPAATQSKSVHGKGSTFADSDVYRMDYPKLGKCLIIN
NKNFAKHTGMAERNGTDVDAANVMKVFCDLGFEAVFKNDQTVSQITNLLKSVSKEDHSKS
AMFVCVILSHGDDGVIYGTDGIIQLKELAGLFRGDRCLSLVGKPKLFIIQACRGTDLDSG
IETDSVSDSEGTQRIPVEADFLYAYSTAPGYYAWRNTVNGSWFISSLCEMLSKHGREMEI
MQLMTRVNRKVALEFQSCSSVPGFNDKKQIPCIVSMLTKDLYFPK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgtgaagaacagtggtaaagcagatggaggagaccatgtggatgccaggaaa
gcagaagccacaccggcagcgactcaaagtaaaagcgtgcatggcaaaggcagcacattt
gctgattcagatgtataccgaatggactaccctaaacttgggaaatgtcttatcatcaac
aacaagaattttgccaaacatacaggcatggcggaacgcaatggaactgatgttgatgct
gcaaacgtaatgaaagtcttctgtgatctgggcttcgaagctgtgttcaagaatgaccaa
actgtttcccagatcacaaatcttttaaaatcagtatcgaaagaggaccacagcaagtcg
gccatgtttgtgtgcgtgatcctaagtcatggggatgacggagtgatctacggcactgat
gggatcattcagctgaaagagctggctggactctttcgaggagatcggtgtctttcacta
gttggcaaacctaaacttttcatcattcaggcttgtcgtggaacagatttggattctggc
attgagactgatagtgttagtgattcagagggcacacaaaggattcccgttgaagcagat
tttttgtatgcgtactctactgctccaggttattatgcttggagaaacacagtcaatgga
tcttggttcatatccagtctatgtgaaatgctttctaagcacggcagagagatggagatt
atgcaacttatgacacgtgtcaaccgcaaggtggcgttggagttccagtcttgttcctcc
gttcctggttttaatgacaagaaacaaataccctgcattgtgtccatgctgaccaaagat
ctgtattttccaaagtga
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