Sphingosinicella microcystinivorans: SmB9_24420
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Entry
SmB9_24420 CDS
T05811
Name
(GenBank) type I secretion protein TolC
KO
K12340
outer membrane protein
Organism
smic
Sphingosinicella microcystinivorans
Pathway
smic01501
beta-Lactam resistance
smic01503
Cationic antimicrobial peptide (CAMP) resistance
smic02020
Two-component system
smic03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
smic00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SmB9_24420
09132 Signal transduction
02020 Two-component system
SmB9_24420
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SmB9_24420
01503 Cationic antimicrobial peptide (CAMP) resistance
SmB9_24420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smic02000
]
SmB9_24420
02044 Secretion system [BR:
smic02044
]
SmB9_24420
01504 Antimicrobial resistance genes [BR:
smic01504
]
SmB9_24420
Transporters [BR:
smic02000
]
Other transporters
Pores ion channels [TC:
1
]
SmB9_24420
Secretion system [BR:
smic02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SmB9_24420
RTX toxin transporter
SmB9_24420
Multiple protein transporter
SmB9_24420
RaxAB-RaxC type I secretion system protein
SmB9_24420
Antimicrobial resistance genes [BR:
smic01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
SmB9_24420
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SmB9_24420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
TPR_6
MscS_porin
Motif
Other DBs
NCBI-ProteinID:
BBE34784
UniProt:
A0AAD1G1J2
LinkDB
All DBs
Position
2603832..2605277
Genome browser
AA seq
481 aa
AA seq
DB search
MGGRFFGLMGGAALAALVATPAAAESLRDAMAAAYANNPVLAGARAGQQAVSEGVVQQLG
EFRPTLGAQAALNQETTGPGRFNDMSRLVTVGVQLSQPVYRGGRLQAGLKAAKSREVAGR
EQLRATENQTIFDTVVAYMDVLRLQAEVDLTSNQVRVLERQLQASNDRFEVGDLTRTDVA
QSDARLALARSQNIAALGNLANARATYERVVGHAPENLEQPQLPPLIPGTQQQAIDLALA
DSPFMLAAKSEQEAARQDVRVQKGARLPSLDATFGVGYTNFRGLSAAGAGVRTSGIDYTQ
NIGATLTLPIFQAGVQGSRIREAEARFSQAEQGTFATERNTIESARQAWENLQSARSTIE
SAKIQVSANELALEGTRAENEVGSRDILDVLNAEQELLDARVTLVRAERDAFVAAYALLA
TVGRAEADDLDLPVEVYRPEAYTAQAKRHWVDWAPGDRQPVTTQVKAPDTMGPPVPPSVQ
Q
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcaggtttttcggtctgatgggaggcgcggcgctcgccgcgcttgtggcaacg
ccggcggcggcggaaagcctccgcgatgcgatggccgccgcttatgccaacaaccccgtg
cttgcaggcgcccgcgcgggccagcaggcagtgtccgaaggtgtcgttcagcagctcggt
gagtttcgtcccacgctgggcgcgcaggccgcgctcaatcaggaaaccaccggaccgggc
cgcttcaacgacatgagccgtcttgtcacggtcggcgtgcagctctcgcagcccgtctat
cgcggcggccgtctgcaggctggtctcaaggccgccaagagccgcgaagtcgcgggccgc
gaacagcttcgggcgaccgagaaccagacgatcttcgatacggtcgtcgcctatatggat
gtgctgcgcctgcaggccgaggtagacctcacctcgaaccaggtgcgcgtgcttgaacgc
cagttgcaggcgtcgaacgaccgtttcgaagtcggcgacctgacccggacggacgttgcg
cagagcgatgcgcgcctcgcgctggcgcgcagccagaatatcgccgcgctcggcaacctt
gcgaatgcgcgcgcgacctatgagcgcgtggtcggccacgcgccagaaaacctcgagcag
ccgcagctgccgccgctcatccccggcacgcagcagcaggcgatcgacctcgcgcttgcc
gacagcccgttcatgctcgccgcgaagtccgagcaggaagccgcgcgtcaggacgttcgc
gtacagaaaggtgcgcgcctgccgagcctcgatgcgacgttcggtgtcggttacaccaac
tttcgcggtctttccgcagcgggcgcgggcgtccgcaccagcggtatcgattatacgcag
aacatcggcgcgacgctgacgctgccgatcttccaggcgggcgtgcagggctcgcgcatc
cgggaggccgaggcgcgcttttcgcaggccgagcagggcacgttcgccactgagcgcaac
acgatcgaaagcgcgcggcaagcttgggaaaacctgcaaagtgcccgctcgacgatcgaa
tcggccaagattcaggtcagcgccaacgaactcgcgcttgaaggcacgcgcgccgagaat
gaggtcggctcgcgcgatatcctcgatgtgctgaatgccgagcaggagctgctcgacgcg
cgcgtcaccctcgtgcgcgccgaacgcgatgcgttcgtggcggcctatgcgctgcttgcg
acggtaggccgcgccgaggcggacgacctcgatctgccggtcgaagtctatcgcccagag
gcgtatactgcgcaggcgaagcggcactgggtggactgggcgcccggcgacaggcagccc
gtgacgacgcaggtgaaggcgccggacacgatggggccgccggttccgccgagcgtccag
cagtag
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