KEGG   Skermanella mucosa: JL100_012470
Entry
JL100_012470      CDS       T07652                                 
Name
(GenBank) TolC family protein
  KO
K12340  outer membrane protein
Organism
smuc  Skermanella mucosa
Pathway
smuc01501  beta-Lactam resistance
smuc01503  Cationic antimicrobial peptide (CAMP) resistance
smuc02020  Two-component system
smuc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:smuc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JL100_012470
  09132 Signal transduction
   02020 Two-component system
    JL100_012470
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    JL100_012470
   01503 Cationic antimicrobial peptide (CAMP) resistance
    JL100_012470
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:smuc02000]
    JL100_012470
   02044 Secretion system [BR:smuc02044]
    JL100_012470
   01504 Antimicrobial resistance genes [BR:smuc01504]
    JL100_012470
Transporters [BR:smuc02000]
 Other transporters
  Pores ion channels [TC:1]
   JL100_012470
Secretion system [BR:smuc02044]
 Type I secretion system
  alpha-Hemolysin/cyclolysin transporter
   JL100_012470
  RTX toxin transporter
   JL100_012470
  Multiple protein transporter
   JL100_012470
  RaxAB-RaxC type I secretion system protein
   JL100_012470
Antimicrobial resistance genes [BR:smuc01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump AcrEF-TolC [MD:M00696]
    JL100_012470
   Multidrug resistance, efflux pump MdtEF-TolC [MD:M00697]
    JL100_012470
SSDB
Motif
Pfam: OEP
Other DBs
NCBI-ProteinID: UEM23506
LinkDB
Position
SKMUc:2730897..2732744
AA seq 615 aa
MIRLQQALSCLLLALLPFTLAVPAHGQAMDGGAFDPVAMVRLAASGSATGVRRLLDSLAP
REITLGIVADTLLRENFGLLAAREAINAAGTQITQKEAAFDLNLVSSVSLSFNKTADRFE
TIGRPRTADTDLTRDDDGDGIPDFVQGNTGTVEEVDGEKVPCVFEDDELINGGVGPGLCG
QEPQYSEREEAASLEGPPTKRLTTTVGVSKMFAFGGQGSLSISSIFNSKAGAQAPALTRP
ISATDPFGWGDKLFWTSSASLSATMPLPYTKGFGKTGSPENFGVEAARSGSRRAVFAEQA
ARNATLAEAAQLYWDMIRSLQDIRILNEQKAVLDQRRARIERLIGTGTVTNYELGQIQQE
LASFALREEAAWTQYLLRSNSLLTLMSADPDLVLIPADAEALLSESVPEPPTDAYDRALV
GHPEIMAAQEDLELAKLSLAFRDNQAAPDIDLVVTAQLTQSDLSFGFGNPADALMNLSRP
DKTNIFIGVRYLYPLGNQAARAALSRARIDERNAFDRARQTRQKIVNSVDRALADIRGAE
SLMLVSRGDMELAGFAYERIVDERERGLATEFEVVNRYQDVLAARLNEASARVEMHKAWI
RLSAAQGTLEEDLSR
NT seq 1848 nt   +upstreamnt  +downstreamnt
ttgatcaggttgcaacaggctctgtcatgcctgttgctggccctgctgccgtttaccctg
gccgtccccgcccatgggcaggccatggatggcggcgcgttcgatcccgtcgccatggtc
aggctcgccgcctcgggatcggcgaccggcgttcggcgcttgctcgacagtctcgcccca
cgggagatcaccctggggatcgtcgccgataccctgctgcgcgagaatttcggcttgctg
gcagcgcgtgaggcgatcaacgcggcgggcacgcagataacccagaaggaagctgctttc
gatctcaacctggtcagctcggtcagtctcagcttcaacaagacggcggaccgattcgag
acgatcggccgcccccggaccgccgacaccgaccttacccgtgacgacgacggcgacggc
ataccggatttcgtccagggcaacacgggtaccgttgaagaggtggacggagagaaagtc
ccctgcgtcttcgaggatgacgaactgatcaacggcggcgtcgggccgggtctgtgcggc
caggagccgcaatattcggagcgggaggaagcggccagcctcgaggggccgcccaccaag
cgcctgacgaccacggtcggcgtgtccaagatgttcgccttcgggggccagggcagcctg
tcgatcagttccatcttcaacagcaaggccggcgcccaggcaccggcgcttacccggccg
atctcggcgaccgacccgttcggctggggcgacaagctgttctggaccagctcggcgtct
ctgtcggcgaccatgccgctgccctacaccaaggggttcggcaagaccggatcgccggag
aacttcggcgtcgaggccgcgcgaagcggcagccggcgggccgtgttcgcggaacaggcg
gcccgcaacgcgaccctggccgaggcggcccagctctactgggacatgatccgcagcctc
caggacatccggatcctgaacgagcagaaggcggtcctggaccagcggcgcgccaggatc
gagcggctgatcggcaccgggaccgtcaccaactacgaactcggccagatccagcaggaa
cttgcctccttcgccctgcgggaggaggccgcctggacccagtacctgctgcggtccaac
tccctgctgaccctgatgtcggccgaccccgacctggtgctgatcccggccgacgcggag
gcgctgctgtccgagtccgtgcccgaaccgccgaccgacgcctacgaccgcgcgctggtc
ggccatccggagatcatggcggcgcaggaggatctggaactggccaagctgtcgctggcc
ttccgtgacaaccaggcggcacccgacatcgacctggtggtgacggcgcagctcacgcag
agcgacctgtccttcgggttcggcaatccggccgatgcgctgatgaacctttcgaggccg
gacaagaccaacatcttcatcggcgttcgctatctgtatccgctcggcaaccaggccgcc
cgcgccgccctgagccgggcccgtatagacgagcgcaacgccttcgatcgggcgcgccag
accaggcagaagatcgtcaattcggtcgaccgggcgctcgccgacatccgcggggccgaa
tccctgatgctggtcagcaggggcgacatggaactggcgggtttcgcctatgagcgcatc
gtcgacgagcgggagcgcgggctcgcgacggagttcgaggtggtcaaccgctaccaggac
gtcctggcggcccgtctcaacgaggcgagcgccagggtggagatgcacaaggcctggata
cggctgagcgccgcccagggcacgctggaggaggacctgtcgcgatga

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