Skermanella mucosa: JL100_012470
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Entry
JL100_012470 CDS
T07652
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
smuc
Skermanella mucosa
Pathway
smuc01501
beta-Lactam resistance
smuc01503
Cationic antimicrobial peptide (CAMP) resistance
smuc02020
Two-component system
smuc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
smuc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JL100_012470
09132 Signal transduction
02020 Two-component system
JL100_012470
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JL100_012470
01503 Cationic antimicrobial peptide (CAMP) resistance
JL100_012470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smuc02000
]
JL100_012470
02044 Secretion system [BR:
smuc02044
]
JL100_012470
01504 Antimicrobial resistance genes [BR:
smuc01504
]
JL100_012470
Transporters [BR:
smuc02000
]
Other transporters
Pores ion channels [TC:
1
]
JL100_012470
Secretion system [BR:
smuc02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JL100_012470
RTX toxin transporter
JL100_012470
Multiple protein transporter
JL100_012470
RaxAB-RaxC type I secretion system protein
JL100_012470
Antimicrobial resistance genes [BR:
smuc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
JL100_012470
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
JL100_012470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UEM23506
LinkDB
All DBs
Position
SKMUc:2730897..2732744
Genome browser
AA seq
615 aa
AA seq
DB search
MIRLQQALSCLLLALLPFTLAVPAHGQAMDGGAFDPVAMVRLAASGSATGVRRLLDSLAP
REITLGIVADTLLRENFGLLAAREAINAAGTQITQKEAAFDLNLVSSVSLSFNKTADRFE
TIGRPRTADTDLTRDDDGDGIPDFVQGNTGTVEEVDGEKVPCVFEDDELINGGVGPGLCG
QEPQYSEREEAASLEGPPTKRLTTTVGVSKMFAFGGQGSLSISSIFNSKAGAQAPALTRP
ISATDPFGWGDKLFWTSSASLSATMPLPYTKGFGKTGSPENFGVEAARSGSRRAVFAEQA
ARNATLAEAAQLYWDMIRSLQDIRILNEQKAVLDQRRARIERLIGTGTVTNYELGQIQQE
LASFALREEAAWTQYLLRSNSLLTLMSADPDLVLIPADAEALLSESVPEPPTDAYDRALV
GHPEIMAAQEDLELAKLSLAFRDNQAAPDIDLVVTAQLTQSDLSFGFGNPADALMNLSRP
DKTNIFIGVRYLYPLGNQAARAALSRARIDERNAFDRARQTRQKIVNSVDRALADIRGAE
SLMLVSRGDMELAGFAYERIVDERERGLATEFEVVNRYQDVLAARLNEASARVEMHKAWI
RLSAAQGTLEEDLSR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
ttgatcaggttgcaacaggctctgtcatgcctgttgctggccctgctgccgtttaccctg
gccgtccccgcccatgggcaggccatggatggcggcgcgttcgatcccgtcgccatggtc
aggctcgccgcctcgggatcggcgaccggcgttcggcgcttgctcgacagtctcgcccca
cgggagatcaccctggggatcgtcgccgataccctgctgcgcgagaatttcggcttgctg
gcagcgcgtgaggcgatcaacgcggcgggcacgcagataacccagaaggaagctgctttc
gatctcaacctggtcagctcggtcagtctcagcttcaacaagacggcggaccgattcgag
acgatcggccgcccccggaccgccgacaccgaccttacccgtgacgacgacggcgacggc
ataccggatttcgtccagggcaacacgggtaccgttgaagaggtggacggagagaaagtc
ccctgcgtcttcgaggatgacgaactgatcaacggcggcgtcgggccgggtctgtgcggc
caggagccgcaatattcggagcgggaggaagcggccagcctcgaggggccgcccaccaag
cgcctgacgaccacggtcggcgtgtccaagatgttcgccttcgggggccagggcagcctg
tcgatcagttccatcttcaacagcaaggccggcgcccaggcaccggcgcttacccggccg
atctcggcgaccgacccgttcggctggggcgacaagctgttctggaccagctcggcgtct
ctgtcggcgaccatgccgctgccctacaccaaggggttcggcaagaccggatcgccggag
aacttcggcgtcgaggccgcgcgaagcggcagccggcgggccgtgttcgcggaacaggcg
gcccgcaacgcgaccctggccgaggcggcccagctctactgggacatgatccgcagcctc
caggacatccggatcctgaacgagcagaaggcggtcctggaccagcggcgcgccaggatc
gagcggctgatcggcaccgggaccgtcaccaactacgaactcggccagatccagcaggaa
cttgcctccttcgccctgcgggaggaggccgcctggacccagtacctgctgcggtccaac
tccctgctgaccctgatgtcggccgaccccgacctggtgctgatcccggccgacgcggag
gcgctgctgtccgagtccgtgcccgaaccgccgaccgacgcctacgaccgcgcgctggtc
ggccatccggagatcatggcggcgcaggaggatctggaactggccaagctgtcgctggcc
ttccgtgacaaccaggcggcacccgacatcgacctggtggtgacggcgcagctcacgcag
agcgacctgtccttcgggttcggcaatccggccgatgcgctgatgaacctttcgaggccg
gacaagaccaacatcttcatcggcgttcgctatctgtatccgctcggcaaccaggccgcc
cgcgccgccctgagccgggcccgtatagacgagcgcaacgccttcgatcgggcgcgccag
accaggcagaagatcgtcaattcggtcgaccgggcgctcgccgacatccgcggggccgaa
tccctgatgctggtcagcaggggcgacatggaactggcgggtttcgcctatgagcgcatc
gtcgacgagcgggagcgcgggctcgcgacggagttcgaggtggtcaaccgctaccaggac
gtcctggcggcccgtctcaacgaggcgagcgccagggtggagatgcacaaggcctggata
cggctgagcgccgcccagggcacgctggaggaggacctgtcgcgatga
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