Simkania negevensis: SNE_A10510
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Entry
SNE_A10510 CDS
T01559
Name
(GenBank) putative RND efflux system, outer membrane lipoprotein, NodT
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sng
Simkania negevensis
Pathway
sng01501
beta-Lactam resistance
sng02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sng00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SNE_A10510
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SNE_A10510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sng02000
]
SNE_A10510
01504 Antimicrobial resistance genes [BR:
sng01504
]
SNE_A10510
Transporters [BR:
sng02000
]
Other transporters
Pores ion channels [TC:
1
]
SNE_A10510
Antimicrobial resistance genes [BR:
sng01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SNE_A10510
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
SNE_A10510
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
SNE_A10510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
CCB88928
UniProt:
F8L826
LinkDB
All DBs
Position
gsn.131:1087186..1088640
Genome browser
AA seq
484 aa
AA seq
DB search
MNFQRFVLFVLLTSLVGCAALKKRQDAPTVTQEVNLKPSFDQALSNGDFTNGDWPEWNWW
VSFGDGQLSAFMDQAIADNPDLMAAISRVRSSEQEARKVRSVLFPQFNASFEDDYQHLSK
DALIRFPPSPVPAVVNQINLKLNFEYEIDLFGKNRETYQAAIGEARAQRAEMSQAYLIVT
VSLAQAYFDFQVNLLRIDAQKEVVQAQKKLVELTEKRVLNNLDDAITLEKAVSNLLKDEE
LLTEYEKNLALSQSQIKILMGLSPDDEMKFQMPQAEYLRPFPLPENLPLNLLVRRPDLMM
QIWKVEAAAHLIGAARAAFFPNINLAAFAGLESLTWAKLFSIESFAGLVAPAINLPLFTG
WKLTAGLEQSFANYDTAVFDYNSLILKAAKEVSDGVKILQASNRETKFQMGVVGSLKKAT
DLTYARYENGVDNFLQVLEMKLELLQQVIREVDLQNIRHLSVLNLIRALGGGYYQQKKEV
TVNE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcagcgctttgttttgtttgttttactcacttcattagttggttgtgctgca
ctaaaaaaacggcaagatgctcccacggttactcaagaggttaacttaaaaccttcgttt
gatcaagccctttcaaatggagattttacaaatggtgattggccagagtggaattggtgg
gtttcgtttggagatgggcagctttccgcatttatggatcaagcaattgctgacaatccc
gatttaatggccgccatttctcgggttcgttcaagtgagcaagaagcgcgtaaggtgcgt
tcagttttatttccacaatttaatgcatcttttgaagatgattatcagcatttgagtaaa
gatgctctcattcgctttccaccttctccagttcctgcagtggtaaatcaaatcaatttg
aagctcaactttgaatatgaaatagatctttttggaaaaaaccgggaaacctatcaagca
gcaattggagaggcccgtgcgcaaagagctgaaatgtctcaggcatacctcatcgtaact
gtttctctcgctcaggcctattttgacttccaagtaaaccttctccgtattgacgctcaa
aaggaggttgttcaggcgcaaaaaaaattggtagaactgacagagaagcgtgttttaaac
aacttagatgatgccatcacgttagaaaaagcggtttccaatttactcaaagatgaagag
ctcttgactgagtatgagaaaaacctagcactgagtcagtcccaaatcaaaattctcatg
ggactgagccctgatgatgaaatgaagtttcaaatgcctcaagcagagtatttacgtccg
tttcctcttccagaaaatcttccgttaaaccttcttgttcgcagacctgatttgatgatg
caaatttggaaagttgaagcagcagctcatttaataggagctgcgcgcgcagcatttttt
ccgaatattaatttagcagcttttgcaggacttgagagtctgacctgggctaagcttttc
agcatagaaagttttgcgggacttgtggctccagcaatcaatctccctctctttaccggt
tggaagttaacagctgggcttgagcaatcatttgcaaattatgatacggctgtttttgat
tacaactctcttattttgaaagcggcaaaagaagtctccgatggagtgaaaattttgcag
gcctcgaatcgagaaacaaagtttcaaatgggagttgttggaagtttaaaaaaagcgaca
gatttaacgtatgcaagatatgagaatggagtcgataactttttacaggtgttggaaatg
aagctagaactccttcagcaagtgattcgcgaggttgatttgcaaaacattcgtcattta
tctgttctaaacttgattcgagctctaggaggaggatactaccagcaaaagaaggaggtc
acagtaaatgagtga
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