Salvelinus namaycush (lake trout): 120048709
Help
Entry
120048709 CDS
T07522
Name
(RefSeq) complement C1r-A subcomponent-like
KO
K01330
complement component 1, r subcomponent [EC:
3.4.21.41
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120048709
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120048709
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120048709
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.41 complement subcomponent C_overbar_1r_
120048709
Peptidases and inhibitors [BR:
snh01002
]
Serine peptidases
Family S1: chymotrypsin family
120048709
Membrane trafficking [BR:
snh04131
]
Endocytosis
Phagocytosis
Opsonins
120048709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
CUB
Sushi
FXa_inhibition
EGF_CA
cEGF
EGF_3
CDCP1_CUB_6
DUF4215
EGF
Motif
Other DBs
NCBI-GeneID:
120048709
NCBI-ProteinID:
XP_038850801
UniProt:
A0A8U0UGD1
LinkDB
All DBs
Position
Sna5:complement(64288711..64297735)
Genome browser
AA seq
707 aa
AA seq
DB search
MDWTPPFIWLLCVSVCECWRLARSLPALHGVVQSPQFPQPYPAALSQQWDLSVPEGYQLQ
LSFTHLDIEPSADCYYDSLTVLYDKKVLAKFCGQENSADGHHPGNQPLLSPGNRLTLVLQ
TDDTNPEPHKHFGFSAHYQAKDIDECSAPDPEDGSGPLCSQLCHNTLGSYMCSCRHGYEL
RHDQQTCVLSCGRGIFDEPGGTLSSPGYPDPSPHGLACQYVISVEPGFIVNLNFTDSFHI
EHIGTQNGPSCLYHWLQVSIPDKEPQKLCGGKIPGLMATNSYTVQLDYHTDWAGLSQGWS
LQYTTQRVQCASPSSITNGRVTPNFPQYYYRDYIQVSCDPGYKLMMDGREIKSYASMCQK
NGQWHLSLPECHIIDCGEPEALLNGGVRLISGSQNQHLSVIQYHCNEPFYSLLGGATVSY
TCAADRTWRDNLDTPVIPSCIPVCGQPTMSISSFERIMGGDKAPDKTIPWQVMLSVDGGR
AGAMVIGDRWIMTTAHNLVQQGKLVLKEKLRVFVGDNDAEKLAKLTPLGVASLHPHPEYK
NPDNANYNHDIGLIKLQQPLTFHAAIMPLCLPPENAAYKSGQIGMVSGFGIKEDDIIAND
LRYIRLPVVDGDACQDSVNKANAAMPTETIPVLTDNMFCAGVPEGGKDSCMGDAGGAYVL
RDGSTKRFWAAGIVSWGVGCGQTGRYGVYTRVAKYISWINKTMEDNK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggactggacccctccgttcatctggctgctgtgtgtgtctgtgtgtgagtgttggcgg
ttggcccggtccctgccagccctacatggggtggtccagtccccccagttcccccagccg
taccctgctgccctgtcacaacagtgggacctcagtgtacctgagggctaccagctccag
ctcagcttcactcatctggacatcgagccgtcagccgactgctactacgactcactcacg
gttttatatgacaagaaggtccttgcaaagttctgtggtcaggagaattctgctgatgga
catcacccaggcaaccagccactcttgtctccaggcaacaggctcaccctggtccttcag
acagacgacacgaaccctgagccacacaagcacttcggcttctccgcccattatcaggcc
aaagacatagatgagtgttcagctccagaccctgaggatggttctggtccactctgctcc
cagctctgccacaacaccctgggctcctacatgtgctcctgtcgccatggctacgagctc
cgccatgaccagcaaacctgtgtcttgtcctgtggtaggggtatatttgatgaaccaggg
gggactctgtccagcccagggtaccctgacccatcaccccacggcctggcctgtcagtac
gtcatctctgtggagcctgggttcatcgtcaacctcaacttcactgacagcttccacata
gagcacataggcacccagaatggacccagctgcctctaccactggttacaggtgtccatc
cccgacaaggaaccccagaagctgtgtggagggaagattcctggactaatggccactaac
tcttacactgtccagctagactaccacactgactgggctggtctgagccagggctggagc
ctgcagtacactactcagagggtgcagtgtgcttcacccagttctatcaccaatggaaga
gtcaccccaaactttccccagtactattacagagactacatccaagtcagctgtgaccct
ggctacaaactaatgatggatggcagagagatcaagagctatgcctccatgtgtcaaaag
aatggacagtggcacctttccctccctgagtgccacataattgactgtggggaacctgaa
gcattgttgaatggaggggtaaggttaatatctggctctcagaaccagcacctctccgtc
attcagtaccactgcaatgaacctttctactcactccttggaggagcaactgtgagctac
acttgtgcagcagatagaacatggagagacaaccttgacacccctgtcattccctcatgt
atcccagtctgtggtcagcccacaatgtccatctcaagctttgagaggatcatgggggga
gacaaagccccagacaaaaccatcccctggcaggtgatgctcagtgtggacggaggcaga
gcaggggccatggtgatcggggaccgctggatcatgactacagctcataacctggtgcaa
cagggaaaacttgtgctaaaggagaaacttcgagtttttgtgggagacaatgatgcagaa
aaactagcaaagctcactcctcttggtgtcgcctctctccacccccaccctgaatacaaa
aacccagacaatgcaaactacaatcatgacatcggcctgataaaactccaacaaccactc
acattccacgctgccatcatgccattgtgtctgccaccagagaacgctgcatacaaaagt
ggccagattggtatggtgtcaggctttggcatcaaagaagatgatatcattgccaacgat
ctcaggtacatacgcctaccagtagtggacggggatgcgtgccaagactctgtcaacaaa
gcaaacgcagcaatgccaacagagacgatccctgttctgacagacaacatgttctgtgcc
ggagtacctgaggggggcaaggactcctgtatgggggacgctggaggggcgtacgtcttg
agggatggtagtactaaacggttttgggctgcaggtattgtcagttggggtgtgggttgt
gggcagactggtagatatggagtgtacacccgtgtggctaaatacattagctggatcaac
aaaaccatggaggacaataagtaa
DBGET
integrated database retrieval system
